Lolium perenne (perennial ryegrass): 127299293
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Entry
127299293 CDS
T08650
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127299293
03036 Chromosome and associated proteins [BR:
lper03036
]
127299293
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
127299293
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127299293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
127299293
NCBI-ProteinID:
XP_051185202
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All DBs
Position
1:111810371..111825236
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AA seq
1500 aa
AA seq
DB search
MQDGTSYVSVAATDAMDVNAKSSGAQLEKMEPVHSNGQPGDDVIIIESEGDGNKVGVQTS
IREGALEDHNEHKCGNTDSTVLEEESTSTDDDSDSDLYGFYLRESENEQTSESDAEKDTE
VSLPEEEVEELVAEFLDVESKAAQAQESLEKESLEKVEAEVRLELSERLQGDALDLAVSI
EMEQFKKAWSTELDDLEIRTADLLEQLDAAGVELPSLYKSIESEAPNVCETEAWKNRTHW
AGSQVSEEANKSIRIADEYLQSCRPVRRKHGRLLEEGASGFLAGKVPVGDDNSVQCHEKS
WNSFNELINSKKCTKSSFGSSNWASVYLASTPQEAAALGLQFPGVDEVEELAEVEGVVDD
IKGVDEMELSEEQRKKYRKVREEDDAKTMKRLRRHMKKRTRGLCKDNIDLASSSNVCSEP
PPLPEKHKTDKNEVSGELLKRTREDGADLDHKRSKTVVIESDDDMLIDSKLALRIKDSEH
SSAELENGVDIIDLDLIPSQSPTLSDIDLPKAFKCTICTEMLNASDVHRHPVLDVIVCGS
CRFLVIEKNRLEGPVSGGYCTWCVQCEELQSCSSCKMLFCTKCLSKNFGEECLSEAKVAG
WQCCCCQPRQLEHLISECDKALSGDVESSDPESDNTSGTKNIDPVSKHKRKKKIRRIMDD
TELGEETKRKIAMEKARQEHVKSMHEQSASKLRSGITGTSSGALSKVFLQDAGDGHIVNV
AREEDEEPVRIPSSVSAKLKLHQVSGIKFMWENVIQSVRTVKSGDKGFGCILAHNMGLGK
TFQVITFLYVVMRCTQLGFRTALIVTPVNVLHNWKKEFTKWHPAELKPLRVYMLEDVPRV
KRLYLLNKWRAKGGVLLIGYSSFRNLSLGRHAREKDTADEISNALQCGPDILVCDEAHMI
KNRKADITHALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI
ENGQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPPKKVFVITVKLSPLQR
KLYRRFLDVHGFSSSASSEKPFKHSGFFAKYQKLAQIWNHPGLLQMAKEQRESVRREDAV
ENFLTDESSSDDNHNTESQLLNGDNKQKIRTDQQSTKIDFVNEESNWWENLIDEGTYKEA
DYSGKMVLLLDVLASCYELGDKALVFSQSLTTLDLVEFYLSKLQIKGKEGKYWKQGKDWY
RLDGSTPSSERQNLVERFNDPANTRVKCTLISTRAGSLGINLHAANRVVLLDGSWNPTHD
LQAIYRVWRYGQVKPVYAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEM
LHLFEFGDDELLDQSGSDSTIINHTKVGMEKLSLPISSETTELPVDGIMLNLLSDHPRWI
AGYHEHEVLLQENEEERLTKEEQDMAWSSFKQSQQLDAVPRKGAHDPERKPTETIVPPPK
RSRQSQQPKSNSNNQKKCSNLNHLLTLRSHGTKAGCTTSCKECGQDISWETLNRSDGRLR
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatggaacctcatatgtttctgtagcagcgactgatgctatggatgttaatgca
aaatcatctggtgcccagttagaaaaaatggaacctgttcactcgaatggacagccagga
gatgatgtcataattattgaatctgaaggggatggaaataaagttggagtgcaaactagc
atcagagaaggtgcccttgaggaccacaacgagcataaatgtgggaatacggatagtact
gtgcttgaagaagaatccactagtaccgatgatgattcggacagtgacttgtatggtttc
tatctccgcgaatcagagaatgaacaaacttcagagtctgatgctgagaaagacactgag
gtgtctttacctgaggaagaagttgaagaattagttgctgaattccttgatgttgagagc
aaagcagctcaagcgcaagaatcacttgaaaaggagtcactggaaaaagttgaagctgaa
gtaagattggagttatctgagaggctccaaggagatgcgttggatttagctgtatcaatt
gagatggagcaattcaagaaggcatggtcaactgaacttgacgacttggagatccgcact
gctgatctgctggaacaacttgatgctgctggtgttgaacttcccagcctatataaatca
atagaaagtgaagccccaaatgtttgtgaaactgaagcatggaaaaataggactcattgg
gctggttctcaagtttctgaagaagctaacaagtcaatcagaatagctgatgaatacctt
cagtcttgtagacctgtaaggagaaaacacggaaggcttctggaggaaggtgctagtggc
tttcttgccggaaaagttcctgttggggatgataattctgtacagtgccatgagaaaagt
tggaattcattcaatgagcttattaattcaaagaagtgtaccaaaagttcttttggaagt
agtaactgggcatcagtttatctggccagtactccccaggaagctgccgccttaggtctc
caatttccaggagttgatgaggtggaggagttagcagaagttgagggtgttgttgatgac
ataaaaggcgttgatgaaatggagctttctgaagaacagaggaaaaaatacagaaaggtt
agggaagaagatgatgcaaagacaatgaaacgcctgcggcgtcatatgaaaaaaaggaca
agaggcttgtgtaaggacaacattgatttggcctcatcatcaaatgtatgctctgagccg
cccccattacctgaaaagcacaaaactgataaaaatgaagtttctggtgagctgctgaag
cgcacacgtgaagatggtgctgatcttgaccacaagaggtcgaaaactgtagtaatagag
agtgacgatgacatgctgatagatagcaagctagctttgcgtatcaaagacagtgagcat
agttcagcagaacttgaaaatggggttgacattattgatcttgatctcatcccgtcacaa
agtcctacgcttagtgatatagatttacctaaggctttcaagtgtacaatttgcaccgaa
atgttgaatgcctctgatgtgcatcgtcacccagtactagatgttattgtttgcgggtct
tgcagatttctggtgatagagaagaatcgtcttgagggtcctgtatccggtggttattgc
acctggtgtgttcagtgtgaagaacttcaaagttgcagttcctgtaagatgctattttgt
acaaaatgcttatcaaagaattttggtgaggaatgcttatcagaagctaaagtcgcgggt
tggcagtgttgctgctgccaacccaggcaactggaacacttaatatctgaatgtgataag
gccctgagtggtgatgttgaatcttctgatcctgagagtgacaatacttctggaaccaaa
aacattgaccctgttagcaagcacaaaagaaaaaagaagataagaagaatcatggatgat
acagaacttggggaggaaacaaagcgcaaaatagcaatggagaaggctagacaagaacat
gtgaagtccatgcatgagcagtctgccagcaagttaaggagtggcatcactggaacttcc
tctggagctctatcaaaagtctttctacaggatgccggggatggccatatagtcaatgtt
gccagggaggaagacgaggaacctgttagaattccaagcagcgtatctgctaaactaaag
cttcatcaggtatcaggaataaaatttatgtgggaaaatgttatccagtctgtcagaaca
gtcaaatccggggataaaggttttgggtgcattttggcacataatatggggcttgggaaa
acttttcaggttattacgttcctgtatgtggttatgagatgtactcagttgggatttcga
acggcacttatagttacccctgttaatgttctgcataattggaagaaagagttcaccaag
tggcatccggcagaactaaagcctcttcgtgtgtatatgctggaagatgtgccaagggta
aaaagactatatttactaaacaagtggcgagcaaaaggtggagtgcttctcattggttat
tcatccttcagaaacttatctcttggaagacatgccagggaaaaagatactgcagatgag
atttcgaatgctttgcagtgtgggccagatattcttgtatgtgatgaagcacatatgata
aaaaataggaaggctgacattacgcacgctctaaaacaagtaaggacacaaagaagaatt
gcgttaactggatccccgttgcagaataatttaatggaatattactgtatggttgatttt
gtcagggaaggctttcttggaagcagccatgaattccgcaacaggttccagaacccaatt
gaaaatgggcagcacacaaattctacatcagatgatgtcaagatcatgaaccaacggtca
cacattttgtatgaacagctgaaaggctttgtccagcgaatggacatgaatgtggtgaag
aatgatctaccaccaaagaaggtttttgtcatcactgtaaagctctctccactgcaaaga
aagctatacagaagattcttggatgtgcatggtttctcaagtagcgcttcttcagaaaaa
ccttttaagcacagtggattctttgccaagtaccaaaagcttgcccagatctggaaccat
cctggccttctccagatggctaaagagcagagagaaagtgtacgccgagaagatgctgtt
gagaactttcttacggacgagagttctagtgatgataatcataatactgaaagtcaattg
ctaaacggagataataaacagaagattagaactgatcagcagtcaacgaaaatcgacttt
gtgaacgaggaaagtaactggtgggagaaccttatagatgaaggtacttacaaggaagca
gattacagtggcaaaatggtcttactccttgatgtactggcaagttgttatgaattaggt
gacaaggcattagtgttcagccagagcttgaccactctggatttggttgaattttatcta
tctaagttgcaaattaaaggaaaagaaggcaaatactggaagcagggcaaggactggtac
aggcttgatgggagcactccatcttccgagcggcagaaccttgtagagagatttaatgac
cctgcgaacacaagagtgaaatgcacattgatatctactcgagctggatctctgggcatc
aaccttcatgcagcaaaccgtgtggtccttctggacggttcatggaatccaacacacgat
ctgcaagctatttatcgggtttggaggtatggccaggtcaaacctgtgtatgcttaccgc
ctaatggctcatggaacaatggaagagaaaatatataagcggcaggtgacaaaagaaggg
cttgcagcaagagtggttgatagacagcaagtgtctagaacaatctccaaagaagagatg
ttgcatctttttgaatttggtgatgatgaattactggaccagagtggaagcgattctacc
ataattaatcacactaaggttggaatggagaagctatccctgcccatcagcagtgaaacc
actgaacttcccgtggacgggatcatgctgaacttgcttagtgatcaccctcggtggatt
gcgggctatcacgaacatgaagttcttctgcaagaaaatgaagaggagagactcaccaag
gaagagcaagatatggcctggtcaagtttcaaacaatcacagcagttggatgctgtgcca
aggaaaggtgcacatgatcctgagagaaagccaacagagaccatcgtcccgccacctaaa
agaagtcgccagtcgcagcaaccaaagtctaattcgaataaccagaagaaatgcagcaat
cttaaccacttgctgactctaagaagccacggcaccaaagctggatgcacgacaagctgc
aaggaatgtggccaggacattagttgggagactctgaacagatcggatggtagattgagg
tga
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