Lolium perenne (perennial ryegrass): 127299772
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Entry
127299772 CDS
T08650
Name
(RefSeq) probable helicase MAGATAMA 3
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127299772
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127299772
5.6.2.5 RNA 5'-3' helicase
127299772
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127299772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
AAA_16
ATPase_2
Motif
Other DBs
NCBI-GeneID:
127299772
NCBI-ProteinID:
XP_051185779
LinkDB
All DBs
Position
5:complement(122088696..122096023)
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AA seq
1163 aa
AA seq
DB search
MADPPRDPAHHDPTGLETMKTFDSEGNQNGDALDPRIRSKNVRGVEANFALKLANNPVKR
SKLDEHKVAMLGKKRARQTVIINDEDAKQAGTGTISTPRRQSRGIGEGAAESQNQLLIRD
QRQAERMGAEWSNSAAPDDQNTESNGDLDLASQDWSKKMNAEESPSDGYEQSVPRQFRQT
MDSNQFKGRPVSSQRAVLTGQNTSDQKPANKRSLVSKKQASVNNTQYHDTSIERLLQEVT
SDKFWHNPDESELQSVPGSFESAEEYIRVFEPLLFEECRAQLYSSYEESLEAVSRDAHVM
VRVKTVERRDRGWYDVIVLPAHECKWTFKEGEVAILSFPRPGPVAQSSNNSNRKTFGSNE
DTESLCGRLVGRVRRHMPYDTRDPIGAIIRFYVGNPSDSSCSGTDILGKLQPQSTWYLTG
IGSLATTQREYVALHAFRRLNVQMQNAVLQPSPEYFPKYQEQPPAMPDCFTPNFSCHLQH
SFNGPQLSAIHWAAMHTAAGTSSGAVKKQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQ
YQRYYAALLKKLAPESYEEIGDSSANSSETVAAGSMDEVLQNMNQNLFRTLPKLCPKPRM
LVCAPSNAATDELLARVLDRGFIDGEMRVYRPDVARVGVDSQSRAAQAVSVERRTEQLLM
KGRDEVIGWLHQLKGREHQLSQEIAILQRELNMVAQAGRSQGSFGVDPDMLTQRDRNRDI
LLQKLAASVESRDKVLVEMSRLLILESRFRAGRNFNLEDARASLEASFASEAEIVFTTVS
SSGRKLFSDLSHGFDMVVIDEAAQASEVGVLPALSLGAARCVLVGDPQQLPATVISKAAG
TLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPSRYFYQGRLTDSESVVNLPDEAYY
RDALMAPYVFYDMSHGRESHRGGSSSYQNVHEAQFAFRLYGHLQKFLKANGGRRASVGII
TPYKLQLKCLQREFAEVMNTEEGKDIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADI
RRMNVALTRARRALWVIGNANALMQSEDWAALVADAKARKCFMDLSSIPSDFLPMNNSSN
TRGMNFSNNTRNMRASGPRPMHFSMLSEPRIGMRSGEDDQSNSFPRNGSYRNPDVRPGDR
SGENLQFGTTRRPNASNDPRRQV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccgcccagagatccagcacatcatgatcccacaggactagaaaccatgaaa
acttttgattctgaaggaaatcaaaatggggatgctttagacccacgaatcaggtcaaag
aatgtaagaggagtagaagccaattttgctttgaagcttgcgaacaaccctgtaaagaga
tctaagttggatgaacacaaagtagcaatgctgggtaaaaagcgagccaggcaaactgtg
ataattaatgacgaggatgcaaagcaagctggcaccggtacaatatccacacccagaaga
cagtctcgtggtattggtgaaggagctgcagaatcacaaaaccagctgctcatcagggat
cagaggcaagctgaaaggatgggggcagaatggagtaattctgctgctccggatgaccaa
aatactgaatccaatggtgatttggatttggcatcccaggattggtcaaagaaaatgaat
gcagaagaatccccctcagatgggtatgaacaatctgtgccaaggcaatttaggcaaact
atggattccaatcagttcaagggccggccagtctcttctcagagagcagttttaacagga
cagaacacttcagatcagaaacctgccaacaagaggtcccttgtttccaagaaacaggct
tcagtgaacaatacgcaatatcatgacacatctattgaacgacttctacaggaagtgaca
agtgataagttctggcacaatccagacgagtcagaacttcagtctgttcctggaagcttt
gaatctgccgaggagtacattagagtttttgagcctttgctttttgaggaatgcagagct
caactatacagttcatatgaggagtctcttgaggcagtgtcaagggatgcacatgtaatg
gtgcgtgtgaaaaccgtggaaaggcgcgatagaggatggtatgatgttattgttctacca
gcacatgaatgtaaatggacttttaaagaaggcgaagtcgcaattttgtcatttcctcgg
cctggtccagttgcccagtcaagcaataattctaataggaagacttttggttcaaacgaa
gataccgagtcactgtgtggacggcttgttggtagagtccggcgccatatgccttatgat
acacgtgatcccattggagcaattatccgtttttatgttgggaacccatctgattctagc
tgcagcgggactgatatcctggggaaactccaacctcaaagcacatggtatctaactggt
attggttctcttgcaacaacacaaagggaatatgttgcgttgcatgcattccgccgtctt
aatgtgcagatgcaaaatgcggttcttcagccaagcccagagtacttccccaagtatcaa
gagcagccacctgctatgccagactgtttcactcctaacttttcttgtcatctccaacat
tcattcaatgggcctcagctatcagcaattcattgggctgcaatgcatacagctgctggc
acaagcagcggggcagtgaagaaacaagaaccatggcctttcacattggtacaaggtcct
ccagggacagggaaaactcatactgtttggggaatgctaaatgttattcatcttgttcag
tatcaacgttattatgctgctctgctaaagaaacttgctcctgaaagttacgaggaaatt
ggtgatagttctgccaacagttcagagactgttgctgcaggctcaatggatgaggttttg
cagaacatgaatcagaacctgtttcgcactcttcccaagctttgccccaaaccacggatg
cttgtttgtgccccatcaaatgctgcaacagatgagctgcttgctcgagttcttgaccgt
ggtttcatagatggtgagatgagggtctaccgccctgatgtcgctcgtgttggagttgat
tcacaatcccgtgctgcacaagctgtttcagttgagcggcgcacggaacagctgttaatg
aagggacgcgatgaggtcattgggtggctacatcagctaaaaggccgtgagcaccagcta
tcgcaggagatagctattctgcagagggaacttaatatggttgcacaggctggtagatcc
cagggttcatttggagtagatccagatatgcttactcaaagggaccgtaaccgtgatatt
ctgcttcagaaacttgctgcttcagtggaaagcagggataaagtactggtcgagatgtca
cgcctgctgatattagaaagcaggttccgtgctggcagaaacttcaatctagaagatgct
agggctagtctggaagccagttttgccagtgaagcggaaattgtttttactacagtatca
agcagtggccgcaagttattttctgaccttagtcatggctttgatatggttgttattgat
gaggctgctcaggccagtgaagtaggagtcctccctgcactttcgcttggcgcagctaga
tgtgtcttggttggtgatccacaacagcttcctgccactgttattagcaaagccgctgga
actttactctacagcaggagtctttttgagaggtttcagcaagctggttgccctacaatt
ttgttgtcagtgcaatataggatgcatccccagatccgtgagtttccatcaagatacttc
taccaagggcgtcttacagatagtgaaagtgttgtcaatttgcccgacgaggcttactat
agagatgcactaatggcaccatacgttttctatgacatgtcacatggccgtgagtcccat
aggggtgggtcatcttcataccagaatgttcatgaagcacaatttgcatttcgtttgtat
ggtcatcttcagaagtttctgaaggctaatggtggcaggagagcatctgttggtataatc
actccatataagttgcagttgaagtgtcttcagcgggaatttgcggaggttatgaatact
gaggaagggaaagatatctacataaacacagttgatgcttttcaaggccaggagcgtgat
gtgattattatgtcatgcgtccgtgcctctaaccatggtgtgggctttgttgcagatata
cgccggatgaatgttgctctcactcgagctaggagagctctatgggttattggtaatgca
aatgccctcatgcagtcagaggactgggcagcacttgtagcagatgcaaaggcgaggaaa
tgtttcatggacttgagtagcattccgagtgacttcctacccatgaacaattcttctaac
acccgaggcatgaatttttcaaacaacacaaggaacatgagagctagtggacctagaccg
atgcatttcagcatgctttctgaacccaggattggaatgagatccggcgaggatgatcag
tccaactcttttccgagaaacggtagttatcggaatccggatgttcgccctggtgatagg
tctggggaaaatttgcagtttgggacgaccaggaggccgaatgcgtccaatgatccaagg
aggcaagtctag
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