Lolium perenne (perennial ryegrass): 127300163
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Entry
127300163 CDS
T08650
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04142
Lysosome
lper04144
Endocytosis
lper05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127300163
04142 Lysosome
127300163
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127300163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lper04131
]
127300163
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127300163
Membrane trafficking [BR:
lper04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
127300163
Exosome [BR:
lper04147
]
Exosomal proteins
Proteins found in most exosomes
127300163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
127300163
NCBI-ProteinID:
XP_051186196
LinkDB
All DBs
Position
5:complement(145854884..145865886)
Genome browser
AA seq
1708 aa
AA seq
DB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESERYICVRETSPQNSVVIIDMAMPSQ
PLRRPITADSALMNPNTRILALKAQIAGTTQDHLQIFNIEAKTKVKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVPGNENPSTLICFASKASNAGTITS
KLHIIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLVYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTAESSTTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPLDYNTITDLFLQRNMIREATAFLLDVLKPNLEEHAFLQTKVLE
INLVTYPNVADAILANGMFTHYDRPRIAQLCEKAGLYLRALQHYAELPDIKRVIVNTHAI
EPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIVVQAAKEYAEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMET
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQFIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDVTHFLDVIRAAEEANVYHDLVKYLLMVRQKAREPKVDGELIFAYAKTDRLSDI
EEFILMPNVANLQNVGDRLFDEELYEAAKIIYAFISNWAKLAVTLVRLKQFQSAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWEHMQFKDVCVKIANVEIYYKAVHFYLQEHPDLINDLLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRADVALELAWTNNMLDFAFPYLLQFIREY
TSKVDDLVKDRIESQKEEKAKESEEKELVAQQNMYAQLLPLALPAPPGMMGGPPPMGGMG
MPPMGGMGMPPMGPGPMPAYGMPPMGSY
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggg
atcgcgccgcagttcgtcaccttcacccacgtcaccatggagtcggagcggtacatctgc
gtccgcgagacctcgccgcagaacagcgtcgtcatcatcgacatggccatgcccagccag
cccctccgcaggcccatcaccgccgactcggcgctcatgaaccccaacaccaggatcctc
gcgctcaaagctcaaatagctggaaccacacaggatcacttgcaaatatttaatattgag
gctaagactaaagttaagtcacaccagatgcctgaacaggttgtgttttggaaatggatc
acaccaaagttgttgggtttggttacacagacatctgtttatcactggtcaattgaagga
gattctgagccagttaagatgtttgataggacagctaatttggccaataatcagattatc
aactatcgatgtgatccagcggagaagtggcttgtgcttattggaattgcacctggtgct
ccagagaggccgcagctggtgaagggaaatatgcaacttttttctgtggatcagcagcgt
agccaagcacttgaagcccatgctgcttcttttgcaacattcaaggttcctggcaacgag
aacccatccaccctcatctgttttgcttcgaaggcatctaatgctggaacaattacttcg
aagctacatattattgaactgggcgcccagccagggaaacctggcttttccaagaagcaa
gccgatctcttcttcccaccagatttccaggatgattttcctgtagcaatgcagatctct
caaaagtatggccttgtctatgtaatcacgaagcttgggcttttgtttgtgtatgacttg
gaaactgccagtgcagtttataggaatagaatcagcccagatcccatattcttgactgca
gagtcttctactactggtggattttatgctattaacagaagagggcaggttttgcatgcc
actgttaatgatgcaaccgttgtaccatttgtcagcggtcaattaaacaaccttgaacta
gccgtgaatcttgccaaaagagccaatctcccaggggcagagaacttggttgtgcaaaga
ttccaggaactgttcgcgcagacaaaatacaaggaagcagcagagctggctgcagaatct
cctcagggtcttctgaggactcctgagactgttgccaaattccagagtgttcctgttcaa
gctgggcaaacacctccactcttgcagtactttggcacactgcttactcgagggaaactg
aatgcctatgaatctctcgaattatctcgccttgttgtcaatcagaacaagaagaacctt
ttggaaaattggttggcagaagacaagttagagtgcagcgaagaacttggagatcttgtc
aagacggtagacaatgatcttgcgctgaagatatacataaaggctagggcaacccctaaa
gtcgtcgccgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcag
gtcggatacactcctgactacctcttcctccttcagaccatcttacgtacagacccacag
ggagctgtcaactttgctctcatgatgtcacaaatggagggtggttgtccgctagattat
aatacaataactgatctcttccttcagagaaatatgatacgtgaggcaacagcttttctg
ttggatgtactgaaaccaaatttggaagagcatgctttccttcaaaccaaggttttggag
atcaacttggtgacctacccaaatgttgctgatgccattcttgctaatggtatgttcact
cattacgaccggcctcgtattgctcagctgtgtgaaaaagctggcttgtacttgcgggcc
ctccagcactacgcagagttacctgatatcaagcgtgttatcgtgaatacacatgctatt
gagccacaggcacttgttgagttctttggaaccctttctaaagaatgggcattagaatgc
atgaaggaccttctactggtcaacttgagaggaaatcttcaaattgttgtgcaggctgcc
aaagaatacgctgagcagcttggagttgacgcctgcataaaactatttgaacaatttaaa
tcatatgaaggcctctacttctttttaggatcctatttgagctcaagtgaggatcctgaa
attcatttcaaatacatagaatcagctgcaaggactggacagattaaagaagttgagcga
gttaccagagagtctaacttttatgatgctgagaagacgaagaacttcttgatggaaaca
aaattacctgatgcccgcccactcataaatgtttgcgaccgctttggttttgttccagat
cttactcactatctctatacaaataatatgctccggtatatcgaaggctatgtacagaaa
gtgaaccctggaaatgctccattggtagtagggcagctacttgatgatgagtgcccagaa
gattttatcaagggtttgatcttgtcggtccgttctcttctccctgttgagccactggtt
gatgaatgcgagaagaggaatcgactacggttacttacacaattcctagagcacttggtg
agcgagggtagtcaagatgtgcatgtccacaatgctcttggaaaaattatcattgatagc
aacaacaatcctgagcatttcctgactaccaacccgttctatgactcccgtgtggtgggt
aaatactgtgaaaagagggatcctacgcttgccgttgttgcttacagacgtggacagtgc
gatgaagaacttatcaacgttaccaacaaaaattcgttgttcaagctgcaagctaggtat
gtggttgaaagaatggatggtgatctgtgggataaagttctacagcctgaaaatgaatat
agaaggcaattcattgaccaagtggtgtctaccgcattgccagaaagcaagagtcctgaa
caagtttctgctgctgttaaggctttcatgacagctgacctccctcatgaactgatagaa
cttcttgaaaagattgtccttcagaactctgcgttcagtggaaactttaatcttcagaat
ctgctcatcttgacagccatcaaggcagactcatctagagtcatggactatgttaacaga
cttgataactttgatggtcctgctgtcggagaagtggctgttgaagcacaactctatgag
gaggcctttgccatattcaagaagttcaacttgaatgtgcaggctgtcaatgttctgttg
gataacatccgaagcattgaaagagctgaagagttcgctttccgtgttgaagaagatgct
gtttggagccaggttgccaaggcccagctgcgtgaaggtctagttagcgaagcaattgaa
tcattcatccgtgcagatgacgtgacgcacttccttgatgtcattcgtgctgctgaggaa
gcaaatgtttaccatgatttagttaagtacttgctgatggtaaggcaaaaggcaagggag
cccaaagtcgatggtgaactcatctttgcatatgctaagactgataggctcagtgacatt
gaagagttcattctgatgccaaatgtcgcgaatctccaaaatgttggtgaccgtttgttt
gacgaagagctttacgaagccgcaaagatcatctatgccttcatctcaaactgggccaag
ctggctgtcaccctggtcaggctgaagcagttccaaagtgctgtagatgctgcccgtaaa
gctaacagtgctaaaacatggaaggaagtctgctttgcttgcgttgatgctgaggagttc
cgtctggcacaaatctgtggcctcaatattatcgtccaggttgatgacttggaggaagtc
agcgaatactaccagaacagagggtgcttcaatgagcttatttcccttatggagagtggt
cttggacttgaacgggcacatatgggcatctttacagaactgggagttctctatgctaga
taccgccctgaaaagctcatggaacacatcaaactgttctccacccgtctcaacatacct
aagcttatccgtgcttgtgatgaacagcagcactggaaagagcttacatacctatacatc
caatatgatgaatttgacaatgctgccacaactatcatgaaccactcaccagatgcgtgg
gaacatatgcaatttaaggatgtttgtgttaagattgctaacgttgagatatattacaag
gcagtgcacttctatttgcaagaacaccctgatctcatcaatgatcttctcaatgtgctt
gcgcttcgtttggatcatacaagagttgtagacataatgcgcaaggctggtcagttgcat
cttgtgaaaccgtacatggttgcagttcagagtaacaatgtctctgccgtcaatgaggct
ttgaatgagctttatgtcgaagaggaggactacgagaggctccgtgaatctgtggacatg
catgataactttgatcagattggtcttgcccagaagcttgagaagcatgaattgcttgag
atgaggaggatagctgcctacatttacaagaaggctggcagatggaagcaatcaattgca
ttgtcgaagaaagataacatgtacaaggattgcatggagacatgctcacagtctggtgat
cgtgagctctcggaggacttgcttgtctattttatcgagcagggaaagaaagaatgtttt
gcttcctgcctcttcatttgctacgacttgattcgtgcggatgttgctcttgagcttgca
tggacgaataacatgcttgacttcgctttcccctatctgttacagttcatccgtgagtac
actagcaaggtagatgatttagtgaaggacaggattgaatcacagaaggaagaaaaggcc
aaggagagcgaagagaaggaactagttgctcagcagaacatgtacgctcaattgcttcct
ctcgccttgcctgctccgcccggtatgatgggtggtccacctccaatgggtggtatgggc
atgcctccgatgggtggaatgggtatgccgcctatgggtcctggtccgatgccagcatat
gggatgcctccaatgggaagctactga
DBGET
integrated database retrieval system