KEGG   Lolium perenne (perennial ryegrass): 127300249
Entry
127300249         CDS       T08650                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127300249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lper03041]
    127300249
Spliceosome [BR:lper03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    127300249
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR41 WD_LRWD1 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_SCAP eIF2A Beta-prop_NWD2_C WDR54 MIOS_WD40
Other DBs
NCBI-GeneID: 127300249
NCBI-ProteinID: XP_051186304
LinkDB
Position
5:complement(150404435..150406011)
AA seq 365 aa
MVKDEQMQYPFFTEGTRELLQARINIAHYSLPRAKARLERANKQPRLGDSGEDPDNHVVK
RAGDFVLNCSEIGDDRPLTACSFSRDASMLATSSWSGITKVWSITPPGITKIAALKGHTE
RATDVAFSPADNCLLATASADKTAKLWNISSDNRSLLTSFHGHQDRLARLAFHPSGRYLG
TASFDKTWRLWDVNTGTQLLLQEGHSRGVYGVGFHPDGSLAASCGLDAHALVWDLRSGRL
YYTLTVHVSPVLGVSFSPNGRLVATAGEDNFCRIWDLRMTGKLLYSIPAHKSLVSQVKFA
PRDGAYLATSSYDTTTALWSAQNYKPIKTLDGHDSTVTGLDISGDGQQIVTVSHDRTIKM
WSCSR
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggtcaaggacgagcagatgcaatacccgttcttcacggagggcaccagggaactgctc
caggcgcgcatcaacatcgcgcactactccctgcctcgtgctaaggccaggctcgagagg
gccaacaagcagccccgcctcggtgactccggcgaggaccccgacaaccatgtcgtgaag
cgggcaggggacttcgtcctcaactgcagcgagatcggagacgaccgcccgctcaccgcc
tgctccttctcccgcgacgcgtcaatgctcgccacgagctcctggagcgggatcaccaaa
gtatggagcatcacgccaccagggataaccaaaatcgcggccctcaaaggccacacagaa
cgtgctacagatgtcgctttctctccggccgataactgcctactagcaacagcctccgcg
gacaaaaccgccaaactatggaatatcagcagcgataacaggtcacttctaacgtctttt
cacggtcaccaggatcgtcttgctcgcctcgccttccatccatccggaagataccttggc
acagccagcttcgacaagacctggagactttgggatgtcaacaccgggacacagctccta
ctccaggaggggcatagcagaggtgtatacggagtcggcttccaccctgacggctcccta
gctgcatcctgtgggcttgatgcgcacgctctggtctgggacctaagatctggaagatta
tactataccctcacagtgcatgtcagtcctgtccttggagtcagcttctcccctaatggt
cgtctagtcgcaaccgcgggtgaggacaatttctgtcgaatatgggatctgaggatgact
ggaaagttgttgtattctataccagcacataaaagtcttgtttcccaggtgaagtttgcg
ccccgggatggtgcttatctggcgacgtcttcctatgacactacaacggcgctatggtca
gcccagaattacaaaccaataaaaactttggatggccatgactccacggttaccggtttg
gatatcagtggagatgggcagcagatcgtgaccgtttcacatgatcgaaccataaagatg
tggtcatgcagcagatga

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