Lolium perenne (perennial ryegrass): 127300348
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Entry
127300348 CDS
T08650
Name
(RefSeq) phytochrome A type 5
KO
K12120
phytochrome A
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127300348
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GFIT
Motif
Pfam:
PHY
PAS_2
GAF
Motif
Other DBs
NCBI-GeneID:
127300348
NCBI-ProteinID:
XP_051186408
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Position
5:158160255..158176478
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AA seq
619 aa
AA seq
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MSSSRPISSSSSRNGQSSRARVLAKTELDAELNAAYEESGEYFDYSKMVEGQRTAPPVQP
GRPERVIAYLQHIQNGKMIQPFGCLLALDEKSFSVIAFSENAPEMLTTVSHAVHSVDDPP
RLVIGTNLRSLFTDQGATALHKALGFADVSLLNPVSVQCKTSGKRFYAIAHRATGCLVVD
FEPVKSTEFPGTAVGDLQSYKLAAKAISKIQSLPGGSMKVLCNTVVKEIFDLTGYDRVMA
YKFHEDEHGEVFAEIRKSGLEPYLGLHYPATDIPQASRFLFMNNRVRMICDCHARSIKVI
EDEALPFDISLLDSALRAPHGCHVQYMENMSSIASLVMAVVVNDNEEDDEIDSEQPAQQQ
QQQQKKKLWGLLVCHHESPRYVPLPLRYACEFVAHVFSVHINNEFELEEKLHEKRILRVQ
TVLYEMLFREVSPLTIVLGTPNIMDLVNCDGAALLYGGKVWRLCNAPTESQIRDISLWMS
EVHRDSTGLCTESLHDAGYPGASALCDRICGMVVAKINSKDALFWFRSCTADVIRWGGAN
NDPSGMDGSRKLQPRLSFKAFLEVVKMKSLSWTDYEMDAIHSLQLILRGMFNDTIKPTWE
ANLDNQIVDMKHDGLAEFR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcaaggcctatttccagttcttccagcaggaacggccagagctcccgggca
agggtattagcaaaaacagaacttgatgctgagctcaacgctgcatatgaagaatctggt
gaatacttcgactattccaagatggttgaaggccagcggaccgctccacctgtgcagcca
gggcggccggagagggtcatagcctacttgcagcacattcagaatggaaagatgatccaa
ccatttggttgcttgttggcccttgatgagaagagcttcagtgttatcgcgttcagtgag
aacgcgccagaaatgctaacaacggtcagccatgcagtacacagtgttgatgatccccca
aggctagttattggtacaaatctacggtctcttttcactgaccaaggtgccacggcactg
cataaggcactagggtttgctgatgtttctttgctcaaccctgtctcagttcaatgcaag
acctcaggaaagcgtttctatgccattgctcatcgagcaactggttgtttggtggtagac
tttgagcctgtgaagtctacagaatttcctggcactgctgttggggatttgcagtcttac
aagcttgctgccaaggcaatctccaagatccagtcactgccaggtggaagcatgaaagtg
ctatgcaatactgtggttaaggaaatctttgatcttacaggatatgatagggttatggct
tataagtttcatgaagatgagcatggcgaggtctttgccgagatcagaaagtctggtctt
gagccttatctaggtctgcactatccagccacggatatcccgcaagcatccaggtttctt
ttcatgaataacagggtaaggatgatttgtgattgccatgcgagatccataaaggtcatc
gaagatgaggcactcccctttgatattagcttgttggattcagcactcagggccccacac
ggttgtcacgttcagtatatggagaacatgagctcgattgcatcccttgtcatggctgtt
gtggttaatgataatgaagaggatgatgaaatcgattctgaacaaccagcacaacaacaa
caacagcagcagaagaagaaactatggggcctccttgtttgccaccatgagagccccagg
tatgtccctttgccgctgcgttatgcttgtgagttcgtagcacatgtgttttctgtccat
atcaacaacgagtttgaattagaggaaaagttgcatgagaagaggatactgagggtgcaa
acagttctctatgagatgctgttcagagaagtctctcccctgactatagtattagggaca
cccaatatcatggacctggtcaactgtgatggtgctgctcttttgtatgggggcaaagta
tggcgcctgtgtaatgctccaactgagtctcagatacgtgatatttccttatggatgtca
gaagttcacagggattccactggcctgtgtacagagagcctccatgatgctggctatcca
ggagcttctgctctctgtgataggatttgtggaatggtagtggctaagatcaactcaaag
gatgcccttttttggttcaggtcatgtacagctgatgtgatcagatggggaggtgcaaac
aatgatccgtcgggcatggatggcagcagaaagttgcagcctaggttatctttcaaagca
ttccttgaagttgtcaagatgaagagtttgtcttggactgattatgagatggatgctatt
cattcgttgcaacttatacttcgagggatgttcaatgataccatcaagccaacctgggaa
gctaatttagataaccagattgttgatatgaaacatgatgggcttgccgaatttagataa
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