KEGG   Lolium perenne (perennial ryegrass): 127300363
Entry
127300363         CDS       T08650                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127300363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lper03021]
    127300363
Enzymes [BR:lper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127300363
Transcription machinery [BR:lper03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127300363
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 127300363
NCBI-ProteinID: XP_051186427
LinkDB
Position
5:complement(159281922..159296106)
AA seq 1943 aa
MEEDQSAVLVAEGAIKSIKLSLSTEAEICTYSINDCPVTHPSQLGNPFLGLPLESGKCES
CGASENGKCEGHFGYIELPVPIYHPCHVSELRQLLTLVCLKCRRMKKGKGKQSNGKENVS
VTACHYADCRALPALSVKETKTADGAFRLELKAPPKKHMTERSWNFLDQYGFHYGGASHN
RILLPEEALNILKKIPDETKKKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSY
DISISLLKKILQKIEQIKKSRAGPPNFESHDVESSDLQLSIGQYIQLRGTTKGPQDAKRY
AISTDSSHLSTKQWLDKMRTLFISKGSGFSSRSVLTGDPYIGVDVVGLPSEVAKRITFEE
QVTDININRLQEVVDKGDCLTYRDGETTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLN
RPPSTHKHSLQAFKVYIHDDHTVKINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELF
SVEKQLTNSHNGKINLQLSNDSLLALKHMSSRTMLRKESANQLAMLLSLSLPAPAVVKSK
PYWTISQILQSALPAELTCEGDRFLVKDSTVVKLDLAKESVQASFSDLVSSINCVKGPGD
ALKFLNALQPLLMEFLLLDGFSVSLQDFSVPKILLEEAQESIKKQSAVLEQSRSSKGQYV
EMRVDNNLKDVKQQISDFVVKSSHLGLLIDPKSDPSVSKVVQQLGFVGLQLYREGKFYSS
RLVEDCFSNFVNRHPPVGNEVQHPPEAYGLVQSSYFHGLNPYEELVHAISTRETIIRSSR
GLTEPGTLFKSLMAILRDVVVCYDGTVRNICSNSIMQLKYREDDATDFPSDITPGEPVGV
LAATAISNPAYKAVLDASQSNNTSWELMKEILQTKVNYKNDTKDRKVILFLNDCSCPKKF
CKEKAAIAVQGCLKKVTLEDCATDICIEYQKQTSLDGTSEATPAFVGHIHLQKAHLETAN
ISTEDILHKCQEVSVKHGMKKGHLAHLFKKITFSTCSDCSFTQKPIDGKVPCLQFSFSED
IPMLSESVEKAVNVLADSMCGVLLDTIIKGDPRIQEAKITWVGSDATSWVKHTKKASKGE
PALEIVVEKGEALQNGDAWRIAMDACIPVMNLIDTRRSIPYGIQQVQKLLGIACSFDQVV
QRLSTTMKTVAKGILKDHLVLVANSMTCTGNLNGFNNAGYKATFRSLKVQVPFTESTLFT
PMKCFEKAAEKCHSDSLGCVVSSCSWGKHAALGTGSSFEILWNENQLKSNKEYGDGLYDF
LALVRTDQEKARYTFLDDVDYLVEDNAIDDMCCLSPVLDDMPTFEDCLEEQVTEKGGPWD
NGTTANARDNSWNVHATVENDSADWGGWGTEKIKDKKTVPEEPADTWADQSAKKDTDGGG
GNWGKQPADQGNSSWNVPVTVENESADWGGWGTEKAKDKKTMPEEPAGLDTWPDQSAKKG
TDGGGRNWGKQPADQGNSSWNVPATAENDSADWGGWGSEKGKGKSVHEEPAEINTWADQS
SKKDTDGGGGNWGKQPNMPASPSVSAWGKNNSDGGDGTWEKQASSCKKDVDQASWGNEPG
PLSRNTWDDKVSKPHTDAQNDSWGSVAAKTRTCTAEDVPWGSTQTSSAEHMDAQNDSWGN
VAAKAASPSDNAWNAAPVSQGNENSEAKEPDAWDGWGSAQANDSSTDDLNKSSASNNSKG
WKSDGWAAKESRRDQRDNLGRPPMRPVERPPRPRFELPADAKTILHEIEPIVLSVRKIFR
ESCDGVNLSLEDEKFIKEKILEHHPEKEKKLSSETDHIMVNKHHTFQESRCFYVVSSDGT
QTDFSYIKCLDNYVRKSYAEEPAELVSQMYFQRRNRDRAPAEASQPTPAENSQATPQEVQ
LETPAPLAETSQATPHEAQLEAPAPLAETASQEALASPSATQQETPVATPQETLAATETI
NKWAEKPDSDSAWGAGASDDKWA
NT seq 5832 nt   +upstreamnt  +downstreamnt
atggaggaggaccaatctgcagtactggtcgctgaaggtgccatcaagagcatcaaactt
agcctatccaccgaggctgagatatgtacttactctataaacgactgccctgttactcat
cccagtcaacttgggaatcctttccttggcttaccacttgagtcagggaaatgcgagtca
tgtggtgcctctgaaaatggcaaatgtgaagggcattttgggtacattgagctgcctgta
cctatatatcatccatgtcatgtcagtgaacttaggcaattactgaccttggtatgtttg
aagtgccgtcgtatgaagaaaggaaagggcaaacagagcaatggaaaggaaaatgtgtca
gtaacggcatgtcactacgctgactgtcgggctctcccggcactatctgtgaaggaaacc
aagacagcagatggtgcatttcgtttagagctgaaagcaccccccaagaaacacatgacg
gaacgttcttggaactttcttgaccaatatggatttcactatggtggagcctcccacaat
aggatattgcttccggaagaggctctgaatatactgaagaagattccggatgagacgaaa
aaaaagctagctgcacggggatacatcgctcagtctggttatgtgatgaaatatcttcca
gtaccccctaactgcctctatattccagaattcacagatgggcagagcatcatgtcctat
gacatctctatatctttgttaaagaagatacttcaaaagatagagcagattaaaaaatca
agagctggtcccccaaacttcgaatcacatgatgttgaatcaagtgatttacaactttct
attggccaatacatacagctcaggggtactacaaagggtcctcaagacgcaaagagatat
gcaattagcactgattcatcacatttatcaacaaaacaatggttagataagatgaggaca
ttgttcatcagcaaagggtcaggattttcatcacgcagtgtacttactggagatccctac
attggagtagatgtagttggcctgccttctgaagtggcaaaaagaataacttttgaagaa
caggttacagacatcaacattaacagattgcaagaggttgttgacaagggagactgtttg
acctatagagatggtgaaacaacatatgcaatcactgtaggatcgaaaggatataccaca
cttaaagtgggtcaaacgatcagtagaagaatcgttgatggtgatgttgtgttcctgaac
aggccacctagtactcacaagcattccctccaggcatttaaagtatacatccatgatgat
catacagtcaaaatcaatccccttatatgctctcctcttgcagcagattttgacggtgat
tgtgtgcatatttattaccctcagtcacttgctgcaaaagctgaagccttggagcttttc
agtgtggagaagcaactgacgaattcacacaacgggaaaataaacctgcagctatctaat
gacagtttgctagctctgaaacacatgtcttcaagaaccatgttaagaaaagaatctgct
aaccagctggccatgcttctgtccctttctcttcctgcccctgctgtggtcaagtcaaag
ccatactggacaatctcacaaatattgcaaagtgcgttgccagcagaattgacttgtgaa
ggggacagattcctagtcaaggacagcactgtcgtaaaactggatcttgccaaagaatct
gtccaggcttcattctcggatctagtgtcttccattaattgtgtaaagggtccaggagat
gcgctcaaattcttaaatgcgctgcagcccttgttgatggaatttttacttctggatggt
tttagtgtaagtctgcaagattttagtgtgcccaagattctgttggaagaagcacaggaa
agcataaagaaacagtccgctgtactggagcagtcaaggtcctcgaaaggccagtatgtg
gaaatgcgtgttgacaacaatctaaaggacgtcaaacaacaaatttcagattttgtcgtg
aagtcctctcatcttggtcttctgattgacccaaagagtgacccatcagtgtcaaaagta
gttcaacagcttggctttgttggtctgcaactctaccgtgaggggaagttctactcgagc
cgtctcgtggaggactgtttctcaaattttgtgaatagacacccacctgttggaaatgaa
gtccagcatcctccagaagcttatggtcttgtgcaaagttcatatttccatggtctcaat
ccttatgaggagctggtgcatgctatatccacaagagaaactatcatccgctcctcaaga
gggttgacagaaccaggaactctgttcaagagtctaatggccatcctgcgagatgtagtt
gtatgctatgatggaactgtgagaaacatctgcagcaattcaatcatgcaacttaagtac
agagaagatgatgccacagattttccaagtgatataactcctggagaaccggtgggtgtc
ttagctgccactgcaatctccaaccctgcttataaggctgtcttggatgcttctcaaagt
aataatacttcatgggagttgatgaaggaaatacttcagaccaaagttaactataaaaac
gatacgaaagatcgaaaagttatcctgtttcttaatgactgctcttgtcccaagaagttc
tgcaaagaaaaggctgctattgcagtacagggctgtctaaagaaagtcactctagaagat
tgtgccactgatatctgcattgagtatcagaaacaaacaagtttagatggtacttcagaa
gctactccagcatttgttggtcatattcaccttcaaaaagcacatttagaaacagcaaac
attagcaccgaggatattcttcataaatgccaagaagtttctgtgaaacatgggatgaag
aaaggacatctcgcacacctgtttaaaaagattactttctctacttgcagtgattgttcc
ttcacacaaaagccgattgatgggaaggttccatgtttgcagttttctttttctgaggac
attcctatgttatctgaatccgttgagaaagctgtgaatgtgctagccgattctatgtgt
ggtgtgcttctggatacaatcataaaaggtgatcctcgaattcaagaggccaaaattacg
tgggttgggtctgatgcaacgtcttgggtgaaacacacaaagaaggcatcaaagggtgag
ccagcactagaaattgttgttgagaaaggtgaagctttgcaaaatggtgacgcatggaga
atagcgatggatgcatgcatcccagtaatgaacctcatcgacacacgaaggtccatacct
tatggtattcagcaagtgcagaaacttcttggcatagcatgctcctttgatcaagttgtc
cagcgcctttcaacaactatgaaaacagttgctaaaggaattcttaaggaccatctggta
cttgtggcaaacagcatgacatgcactggtaacttgaatgggttcaacaatgctggttat
aaggcgaccttccgttcattaaaagttcaagtaccttttacagagtccaccttgttcacc
cctatgaaatgctttgagaaggctgctgagaaatgccattctgattcattgggttgtgtg
gtctcatcatgttcgtggggcaagcatgcagcacttggcactgggtcatcttttgagatt
ctttggaacgaaaatcagctaaaaagcaacaaggagtatggtgatggcctgtatgatttc
ctggcattggtgaggactgaccaagaaaaggctagatacacattcctggacgatgtggac
taccttgttgaagacaatgcgatagatgatatgtgctgcttatcaccagtactggatgat
atgcccacttttgaagattgtcttgaagaacaagttaccgagaagggtggcccatgggat
aatggcacaacggcgaatgcaagagacaattcttggaatgtgcatgcgacagtggagaat
gattccgctgattggggcggctggggcactgaaaagataaaggataagaagactgtgcca
gaagaaccagcggatacttgggctgatcagagtgctaagaaggatactgatggaggtggt
ggtaactgggggaagcagccagcagatcaaggaaattcatcttggaatgtgcccgtgaca
gtggagaatgaatctgctgattgggggggctggggcactgaaaaggcgaaggataagaag
actatgccagaagaaccagctggactcgatacttggcctgatcagagtgccaagaagggt
acggatggaggcggtcgtaactgggggaagcagccagcagatcaaggcaattcatcttgg
aatgtgcctgcgacagcggagaatgattctgctgattggggtggctggggcagtgaaaag
ggaaagggtaagagtgttcatgaagaaccagctgaaatcaacacttgggctgatcagagt
tctaaaaaggatacagatggaggtggtggtaactggggtaagcagccgaacatgccagca
tcaccatcagtcagtgcatggggcaaaaataattcagatggaggtgatggtacctgggaa
aagcaagccagctcttgcaagaaagatgttgaccaggcctcttggggaaatgagccaggg
ccactgtcaagaaatacatgggacgacaaggtttctaagccgcatactgatgcacagaat
gattcctggggaagtgtggcagctaagactcggacttgtactgcagaagatgttccttgg
ggaagtactcaaacttcttctgcggagcatatggatgcacagaatgattcctggggtaat
gtggctgcaaaggctgcttcaccgtcagataatgcgtggaatgctgctccagtttcccag
ggaaacgagaattcagaagcaaaggagccagatgcttgggatggctggggttctgctcaa
gccaatgactccagtactgatgatttgaacaagagcagtgcttctaacaacagcaaaggc
tggaaatcagatggatgggctgccaaagaaagccggagagaccaaagagacaatctgggt
aggcccccaatgagacctgtggagaggccaccaagaccacggttcgaactaccagctgat
gcaaaaacgattttacacgaaattgaacctattgtattatcggtcagaaagatcttccgt
gaatcatgcgatggtgtaaatctttccctggaggatgagaagttcatcaaggagaagatt
ctggagcaccaccctgaaaaggagaagaagctgtcctctgaaactgatcatataatggtt
aacaagcaccacacgttccaggagagtcgctgcttttacgtggtgtcatcagatggaaca
cagacagacttctcatacatcaagtgcctggacaattacgtgaggaagagctatgcagaa
gagcccgccgaactggtctcccagatgtacttccagaggcgcaaccgtgatcgagcacca
gctgaggcttctcaaccaactccggcagagaactcgcaagccactccacaggaggttcag
ctagagactccagccccgctggcagagacctcgcaagccactccacatgaggctcagcta
gaggctccagccccgctggcagaaacagcttcacaagaggctctagcttctccatcagcg
acccagcaagagaccccagtggcgactccacaagagactctggcagccacagagaccatc
aacaagtgggctgaaaagccagattctgattcagcatggggtgcaggagcctctgatgat
aagtgggcctga

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