Lolium perenne (perennial ryegrass): 127300389
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Entry
127300389 CDS
T08650
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
lper04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127300389
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127300389
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lper01009
]
127300389
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127300389
03036 Chromosome and associated proteins [BR:
lper03036
]
127300389
Protein phosphatases and associated proteins [BR:
lper01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
127300389
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
127300389
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
127300389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPFR1_M
PPP2R1A-like_HEAT
HEAT
HEAT_2
PIK3R4-like_middle
RELCH_N
RELCH_C
HEAT_EZ
Htt_N-HEAT_1
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
HEAT_GCN1_C
TPR_DNAAF5
TOR1L1_N
HEAT_GCN1
CLASP_N
Cnd1
Adaptin_N
HEAT_GCN1_C_2
TPR_TNPO3_IPO13_3rd
DUF3102
Motif
Other DBs
NCBI-GeneID:
127300389
NCBI-ProteinID:
XP_051186455
LinkDB
All DBs
Position
5:complement(160227455..160237590)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVRDKSVESLCRIGAQMKEN
DIVDFFVPVVKRLASGEWFTARVSSCGLFHIAYPSATDPLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGADITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPILDQSVVDKTVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtcgatgagcctctttatccaattgctgtgctgatagatgagcttaaaaat
gaagacattcagttgcgtctgaactctatcagaagactttccacaattgcacgggcactt
ggggaagaaagaaccaggaaggaactgatacctttcctcagcgaaaacaatgatgatgaa
gatgaggtgcttcttgcaatggctgaagaattgggtgttttcattccttatgttgggggt
gtagaacatgcccatgtcttgctcccaccattggagacattgtctacagtggaggagact
tgtgtccgagacaaatcagtcgagtcattgtgccgtattggtgcacagatgaaggaaaat
gacattgttgacttcttcgttccagtagtgaagaggctagcgtctggtgagtggtttaca
gctcgagtatcatcctgtggtcttttccatatcgcctacccaagtgccaccgatccattg
aaaacagaactgaggaccatttatggtcagttatgtcaagatgatatgcctatggtcaga
agggcggctgcgtcaaacctcgggaaatttgctgctactgttgaacagagccatttgaag
acagaaatcatgtcgatcttcgacgatctgactcaagatgatcaagattcagtacgttta
ttggctgttgaaggatgtgccgctcttggaaaactgttggaaccacaagattgtgtagca
catatccttccagtcattgtcaatttctcccaggataaatcttggcgtgtccgttatatg
gttgccaatcaattgtatgagctctgcgaggctgttggtcctgagcctacgagagcggac
ttggtgcctgcatatgttcgtctccttcgtgataatgaggctgaagtgcggatagcagct
gccgggaaagtcacgaagttctgtaggatattaagtccacagcttgcaattcagcacatt
cttccatgtgttaaggaattatcatcggattcgtctcagcatgttcgctcagctttggct
tcagtcattatgggaatggcccctgtgttgggaaaggatgctaccattgagcaacttctt
cctatttttctttctttgctgaaggacgaattccctgatgtgcggctcaacataatcagc
aagcttgatcaagtcaatcaggtcattggaattgacttgctgtcacaatctctattgccg
gccattgtagaacttgcagaggataggcactggagggttcgacttgcaataattgagtac
atccctctgttggccagtcagttaggtgttgggttctttgatgacaagctcggggctctt
tgcatgcaatggttggaagataaggttttctccatcagggaagctgctgcgaataacctg
aagcgcctagcagaggagtttggtccagagtgggcaatgcaacatataattcctcaggta
ttggagaagataaacaacccacattatctgtatcgcatgaccatcctgcaagctatctca
ttgctcgcgcctgtcatgggtgcagacataacatgtcagaagctgctccctgtcgtcatt
aattcgtcaaaggacagggttccgaacatcaagttcaatgttgcaaaagttctgcagtcg
cttgtaccgatccttgatcaatctgtcgtcgataagacggtgaaaccatgcctcgtcgag
ctgagcgaggacccggatgtggacgtaagatactatgccaaccaggcccttcaggcatgt
gaccaaatcatgatgtcaagctaa
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