Lolium perenne (perennial ryegrass): 127300696
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Entry
127300696 CDS
T08650
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127300696
03009 Ribosome biogenesis [BR:
lper03009
]
127300696
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127300696
Spliceosome [BR:
lper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127300696
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Helicases
127300696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
127300696
NCBI-ProteinID:
XP_071676021
LinkDB
All DBs
Position
5:82478135..82488180
Genome browser
AA seq
782 aa
AA seq
DB search
MDPDFRFDPDGSDDEAAAASARRKPAQSPWEFSTYAQSVAAEHASRRTTSIDEKISQALR
GRRNPSMPDGSEDDDEEEDAAEDDDSDEEAVKGESGDEEDELEESDDDDEESEGEEEEVD
EEDSGEEDGEVSEPEQGEEDEEEEDPAQEVSFSGTPDPSKFFASSEGASFSANSFLELNL
SRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPK
RIPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALRSNPDIVVA
TPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSVEINELIRMCPKRRQTMLFSATM
TEQIDELVKLSLNKPIRLEADPSLKRPATLTEEVVRIRRSREANQEAVLLALCLKTFKER
VIIFSGTKHSAHRLKIMFGLSGMKAAELHGNLTQAQRLEALEQFKKQEADILIATDIAAR
GIDIVGVRTVINFACPRDVTTYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKAGSQ
LKSRIVAEKPVADCAKLIEQLEHQISNIILEEREEMALRKAEMEATKAENMIAHKDEIYS
RPKRTWFATEKEKKTLAKAAKESMGQVKSGSGVVSAQQAEDLRLKEKRRREREKNLPRKK
RRKLEAQREMLEDDRADEEEAQESEGGKKAKNSQSVVDVAYRRAKSMKATGKKGIVAVKG
KNEKKAKQPSEKGQTRQEEMHELFQNDMSEWKQGRALKKKDSSFAKKSKNSFKSKSRYKR
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacttccggtttgacccggacggttccgacgacgaggcggcggcggcatcc
gcgcggcgcaagccagcgcagtctccgtgggagttctccacgtacgcgcagtccgtggcg
gcggagcacgccagccgccgcaccacctccatcgacgagaagatctcacaggccctcagg
ggacgacgcaacccctctatgcccgacggatcagaggacgacgacgaggaggaggatgct
gctgaggatgatgatagcgacgaggaggcggtgaagggggagagcggggacgaggaggac
gagctagaggagagcgacgacgacgacgaagagagcgagggggaggaggaggaggtagac
gaggaagacagcggggaggaggatggcgaagtgagtgaacctgagcaaggagaagaggac
gaagaggaagaagatcctgcacaggaggtgagcttcagtggcactccggacccttccaag
tttttcgcgtcgtccgaaggagcgtcgttcagcgcaaattcgttccttgagctcaaccta
tcacgcccactcgttcgagcttgtgaagcacttggctaccagaaaccaacacctattcag
gctgcatgcatacctttagcattaacagggcgggatatatgtggcagcgctataacgggg
tcagggaagacagctgctttctctctgcctgtgctggagcgtctacttttccggccaaag
cgtatacctgctattagggtgcttattcttactccaactagagagttggctgctcaggtt
cacagtatgattgaaaaattagcccagtttaccgatatcaggtgctgtctcatagttggt
ggacttccaactaaggtacaagaggtagctttaaggtcaaatcctgacattgttgttgcc
actcctggtcgcataatagatcatctacgcaattccctttctgttgggcttgaagatctt
gcaattttgatccttgatgaagctgaccgtttgctggaattgggtttcagtgttgaaatt
aatgaactgattcgcatgtgtcctaaaagaaggcagacaatgctcttttctgctacaatg
acagagcaaattgatgaacttgtgaaactttcgctaaacaaaccaattcgtcttgaagcc
gatccatcgctgaaacgccctgcaacattgaccgaagaggtagttagaataagacgatca
cgtgaagcaaatcaagaagctgttctgcttgctctctgtttgaagaccttcaaggaaaga
gtaatcatttttagtgggacaaagcattctgctcacaggttaaaaataatgtttggtcta
tctgggatgaaagctgctgaacttcatggcaaccttacacaggcgcagcggcttgaggca
ttagaacaattcaaaaaacaagaggcggatatcctgattgcaactgatattgcagctcgt
ggtattgatattgttggtgttcgaacagtaataaattttgcctgcccacgtgacgtcaca
acttatcttcatcgtgttggtcgtactgctcgagcaggcagggagggctatgcagtgaca
tttgttaccgatgatgatagatccctcttgaaagctatcgcaaagaaagctggttcacag
ctaaaaagccgcattgttgcagagaaacctgttgctgactgtgcaaaattaatcgagcaa
ctggaacatcaaatttctaacataattctagaagaaagggaggaaatggcattacggaaa
gctgaaatggaagcaacaaaggcagaaaatatgatagctcacaaggatgagatatactca
cgcccaaagagaacctggtttgctactgagaaggaaaagaagactttggcaaaggctgct
aaagaatccatgggtcaagttaaaagtggttccggagttgttagtgctcagcaagctgaa
gatcttcgtctgaaggagaaaagaagaagagagcgtgagaaaaatctacctaggaagaaa
cgccgaaaattagaggcacaacgggagatgctggaggacgacagggcagatgaggaggaa
gctcaggaaagcgaaggagggaagaaagcaaagaatagccaatctgtagttgatgtggct
tatcgtagggcaaaatcaatgaaggctacgggcaaaaagggtattgttgctgtcaaagga
aagaatgagaaaaaggcaaaacaaccttctgaaaaggggcagactaggcaagaggaaatg
cacgaactgttccagaatgatatgagtgaatggaaacagggccgcgccttgaagaaaaag
gacagctcttttgcaaagaaatccaagaactcttttaagagcaaatcaaggtacaagcgg
cgaaagtag
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integrated database retrieval system
