Lolium perenne (perennial ryegrass): 127300880
Help
Entry
127300880 CDS
T08650
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127300880
Spliceosome [BR:
lper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127300880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
127300880
NCBI-ProteinID:
XP_051187036
LinkDB
All DBs
Position
7:complement(149627860..149640057)
Genome browser
AA seq
1172 aa
AA seq
DB search
MPGTADMEAEPEAAAALVALGFEPSPSKLDNFKNSLHLLSNGNTSDFDAWVSLISSAEET
SANDIEVISLVYRSFLLEFPLCHGYWIKYAAHKARLCTYEDVVEVYEQAVQAVPHSVDLW
VSYCGFGMSVYEDPALIRSLFERGLSLVGKDYFCYHLWDKYIEFENSQKQLIQLATMYIN
MLKFPTKKLHKYYESFKKLVKSLEQEVTHCGAEISTENIHMSEVMEAEESEGDISAKIAG
LFDQGGHLKPEALKQYLFAGDRLYRISSKLNEEICGFEASIRRPFFHVKPLDDDQLENWN
QYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYSEYVDAKGGREIANYALGRASSSF
VKGVPTFSMYYAMFKEQVGDAPGARALFAKGSSNFTSDFYTNINRMANMEKRMGNTKAAT
EIYENAIEDAMQKHNTEVLPDLYANFAQFKYAASHSIAEAQEVFVKGIEQAPCKPLIKGF
IQFMSTYGGSTEIPLLDSLISNAVTPGSDVSTALSPEDREDISLLFLKFVDLYGDVQELR
KAWARHSKLFPHNTRNLSQQCCIADSDKRRIAEFLIVAHDHTPEGTTRLKQSSKSDTWLI
DKNVGSQVDMDAADPGKRQGVANEQKIVGTVDAHLEVGDTAQKFIDMAHSQHSLEKHGTQ
SQMDSHADQKTIHDLSVCEQIEPTTKAHASVSERAPQAESCNYDSPSQSIADAQINAQVD
VKTIQLSAIDHSETVCSRSDSPSGASLPEEGIPSDTTQIIPALEENQHEKIQVKLETEYD
VSVSNAKPEKSTDSPEATQCDREVQTQVMSVCAKPSTSEMATTQTTTGSQFSSDNAVTAQ
VSVQHQMDNPQAYESSNLCLTGQNMQQMQQQGLAYAIPQNVQTSPQTQAQVVAQPNQGNQ
QYLQMMQGYASQMWQYYQQQLYYLQAQHNQQMQSLQQQQLPTEHLQQSFAQQVQQLNQQM
VLWQQQVQQQQQQAQPVQQQSDKAQGQQYHPSPGDGKHEQNKHLPQESQIDHQNQQSQQQ
QLLYFQQQQQVYFMQQQQQMYQQQQQQQQQLMQQQQYLSQMPQQKQDVVQQQQLFQQQQQ
QLYEQQQKELVVLQQQQQQFAQQQMQQYLQQQAKQQGFRDQNCELNPQDTRKMQMEHGQQ
SEASQSDGSKLRGGDQSELSYPSTPQSQRSNY
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgccggggacggcggacatggaggcggagccggaggctgcggccgcgctcgtcgccttg
gggtttgagccctctccgtcgaagctcgataatttcaagaacagccttcatttgctgagc
aatggaaacacgagcgatttcgatgcttgggtatcgttaataagttccgcagaggaaact
tctgctaatgacatagaggttattagcttggtctaccgtagcttcttattggaatttcct
ttgtgccacggctactggattaaatacgcagctcacaaagcacggttatgcacatatgaa
gatgtggtggaggtttatgagcaagccgtccaagctgtacctcattctgtcgatctttgg
gtcagttactgtggatttggtatgagtgtgtatgaagaccctgctcttattagaagctta
ttcgagaggggtttgtcgcttgttggaaaggactacttctgttaccatctttgggataag
tacatagagtttgagaattctcagaagcagctgattcagcttgctaccatgtatattaac
atgctgaaatttcctacaaagaagctgcacaagtattatgagagttttaagaagttggta
aaatcactggaacaagaggttacacattgtggtgctgaaatatctacagaaaatatacat
atgtctgaagtgatggaagctgaggaatctgaaggggatatctcggccaaaattgctggc
ttatttgaccaaggtgggcatcttaagcctgaagcattaaagcagtacttatttgctggc
gatcgtctctaccggatatccagtaaacttaatgaagaaatttgcggctttgaggcctcc
atcagaaggcctttttttcatgtcaagccacttgatgatgaccagcttgaaaactggaac
cagtatcttgattttgttgagaagaatggcgattttgactgggctgtaaaactgtatgag
aggtgcttaatcccttgtgctaattattcagagttttggattcgctactctgagtatgta
gatgccaaaggtggccgagagattgcaaactatgctcttggtcgggcatcttcgagtttt
gtgaagggagtccccactttcagcatgtactatgctatgttcaaagagcaagttggtgat
gcaccaggtgctcgtgctctttttgctaaaggaagcagtaatttcacttcagatttctat
actaatattaatagaatggccaacatggagaaacgcatgggaaatactaaagcagctacg
gaaatatatgagaatgcaattgaggatgcaatgcaaaagcacaacactgaagtacttccg
gacttgtacgcaaattttgcgcagttcaaatatgcggcaagtcatagcattgctgaagct
caagaagtctttgtcaagggaatcgaacaggcaccctgtaaacctctgattaagggattc
atacagttcatgagtacatatggaggatctacagaaatacctcttcttgattctcttatt
tctaatgccgtgactcctggatctgatgtatcaacagctttaagccctgaagatcgagaa
gatatctcgttgttgtttttgaagtttgttgacctgtatggggatgttcaagaactcaga
aaggcatgggctaggcacagcaaactttttcctcataacacaagaaacctgtcgcagcag
tgttgtatagctgatagtgacaagaggagaatagctgaatttctgatagttgctcatgac
catactccagaaggtacgaccagattgaaacagtcatccaaaagtgacacttggctaatt
gataaaaatgttggttcacaagtggacatggatgctgcagatccaggtaaaagacaggga
gttgccaatgagcagaaaatagttgggactgttgatgcgcacctggaggttggtgataca
gctcagaaattcattgacatggctcacagtcagcatagcttggagaaacatggaacacaa
agccaaatggattcacatgctgaccaaaaaaccattcatgatttaagcgtatgtgaacaa
attgaaccgacaacaaaagcccatgcttctgtaagtgagagagcccctcaagctgaatca
tgtaattatgattctccttcacaatcaattgctgacgcgcagattaatgcacaggttgat
gttaagaccattcagctatctgcaattgatcattcagaaacagtatgctcaagatccgat
tcgccatctggggcaagcttacccgaagaaggaattccttccgatacaactcaaataatt
ccagcgttagaggaaaatcaacatgagaaaatccaagtaaagctggaaacagagtatgat
gtgtctgtcagtaatgcaaagccagagaagtccactgatagtccagaagcaactcaatgt
gatagggaagttcagacacaagttatgtctgtctgcgcaaaaccttccacttcagaaatg
gcaacaacacaaactaccacaggttctcaattttcttccgacaatgcagtgactgcccaa
gtttcagttcagcaccagatggataatcctcaagcttacgaatctagtaacctttgtttg
actgggcaaaacatgcagcagatgcagcagcaaggtcttgcttatgcaattcctcagaat
gttcaaacatccccacaaactcaagctcaagtcgttgcacaacctaatcagggaaaccaa
cagtacctccaaatgatgcaagggtatgcatcccagatgtggcaatattaccagcagcag
ctgtattacctgcaggctcagcataatcagcagatgcagagtttgcaacagcagcagctt
ccaactgagcatctccagcaaagttttgctcagcaggtacaacaactgaaccaacaaatg
gtactttggcagcaacaggtccagcagcagcaacaacaggcacaaccagttcagcaacaa
tctgacaaagcgcagggtcagcagtatcacccttctccaggggatggtaaacatgaacaa
aataaacatctgccgcaagaatctcaaatcgatcatcaaaatcagcaatcacagcagcag
caactgctctatttccagcagcagcagcaggtgtactttatgcagcagcagcagcagatg
taccaacagcaacaacagcagcagcagcagctaatgcagcaacaacagtatctatctcag
atgccgcagcaaaaacaagatgtggtacaacagcagcagctatttcagcagcaacaacag
cagctttatgagcaacaacagaaggagttggtagttctgcagcaacagcagcaacagttt
gcccaacaacagatgcagcagtacctgcaacagcaagcaaaacaacaagggttcagagat
cagaactgtgagctaaatccgcaggacacaaggaagatgcagatggagcatggtcaacaa
tctgaagcctcacagagtgatggttccaaattgcggggtggtgatcaatctgagttgtcc
tacccatcaactccacagtctcagcgttccaattattga
DBGET
integrated database retrieval system
