Lolium perenne (perennial ryegrass): 127301315
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Entry
127301315 CDS
T08650
Name
(RefSeq) probable ubiquitin receptor RAD23 isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03420
Nucleotide excision repair
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127301315
09124 Replication and repair
03420 Nucleotide excision repair
127301315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lper03051
]
127301315
03400 DNA repair and recombination proteins [BR:
lper03400
]
127301315
Proteasome [BR:
lper03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
127301315
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127301315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_RAD5A
CUE
TECR_N
Dsc3_N
Crinkler
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
127301315
NCBI-ProteinID:
XP_051187486
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Position
5:191855671..191861527
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AA seq
397 aa
AA seq
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MKVSVKTLKGSSFQIEVNPADKISDVKKLIESSQGQNVYPADQQMLVHQGKVLKDETTLE
ENKVLENNFLVIMLRQNKGSSSAAPAKSKEPSNQAPPTQTVPATPASQAPVTPAPQAVTA
PAPISVPVSAPGPAATASPAPAVAVSTEAEPYGQAASNLVAGSNLEATIQSILEMGGGTW
DRDTVLRALRAAFNNPERAIEYLYSGIPVPMDIPAPPPSAQPADPAQALQATQAAVASSG
PNASPLDLFPQALPNASANAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQN
PQILQLIQDNQAEFLRLINEPAEGDEDENLLDQFAEGVVPQTIAVTPEENEAILRLEGMG
FDRALVLEVYFACNKDETLAANYLLDHINEFDDGGPQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctccgtgaagacgctcaagggctccagcttccagatcgaagtcaaccccgcc
gacaagatttctgatgtgaagaagctcattgagagttcacaagggcagaatgtgtaccca
gctgaccagcaaatgcttgtacatcaagggaaggtgcttaaggatgagactacgttggag
gaaaacaaagttcttgaaaacaactttcttgtgataatgcttagacagaataagggctca
tcaagtgcagctccagctaaatcgaaggaaccctcaaatcaggcaccacctactcagaca
gtgcctgctactcctgcctctcaagctccagtcaccccagcacctcaagcagtgactgca
ccagcacccattagtgtacctgtcagtgctcctggtccagctgccacagcctccccagct
cctgctgttgccgtctccactgaagcagaaccttatggtcaggctgcctcaaaccttgtt
gcggggagcaacctagaggcaacaattcagtcgattcttgaaatgggtggcggaacatgg
gacagagacactgtgctgcgtgccctacgggctgctttcaacaatccggagagggctatt
gaatatttatactctggtattcctgtgccgatggacattcctgcaccacctccaagtgcc
cagccagctgatcctgcccaggctttacaagcaactcaagctgcagttgcctcttctgga
cctaatgctagtcccttggacctcttccctcaagcccttccaaatgcttcagcaaatgct
gctggtgagggaaatctggatgttttgcgtaacaatgcacagttccgaagcttactttcc
ttagtgcaggctaaccctcaaatcttacagccattgcttcaagagctgggaaagcagaat
cctcagattttacagctgattcaggacaaccaggctgagttccttcgtttaatcaatgaa
ccagctgagggtgatgaagacgagaatctcctagaccagtttgcagagggagttgttcct
cagaccatagctgttactcctgaggagaatgaagctatacttcgtcttgaaggaatgggc
tttgaccgggcgcttgttctggaggtgtacttcgcctgcaacaaggatgagaccttggct
gcaaactacctgttagaccacattaatgagtttgatgacggagggccgcagtaa
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