Lolium perenne (perennial ryegrass): 127301573
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Entry
127301573 CDS
T08650
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127301573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127301573
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127301573
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127301573
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
127301573
NCBI-ProteinID:
XP_051187800
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Position
5:196690575..196691698
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AA seq
277 aa
AA seq
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MATPAVEKPEGVEIREVWADNLEAEFAVIRDLVDDYPYVAMDTEFPGVVCRPLGTFKSPA
DFNYATLKANVDMLKLIQLGLTFSNSDGTLPTPNNRPCVWQFNFRGFDPRTDVAAADSID
LLRRSGIDFARHASDGACARRFAELLMSSGVVLNPDIHWVTFHSGYDFGYLLKLLTGSTL
PDTSAGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT
ALSFNKLKDSYFGGLTERYAGVLYGLGTEGGETTSVH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggccgtcgagaagcccgagggggtggagatccgcgaggtgtgggcggac
aacctcgaggccgagttcgcggtgatccgggacctcgtggacgactacccgtacgtggcc
atggacacggagttcccgggcgtggtctgccgcccgctgggcaccttcaagtcccccgcc
gacttcaactacgccacgctcaaggccaacgtcgacatgctcaagctcatccagctgggc
ctcaccttctccaactccgacggcaccctccccaccccaaacaaccgcccctgcgtctgg
cagttcaacttccggggcttcgacccgcgcaccgacgtggccgccgccgactccatcgac
ctgctccggcgcagcgggatcgacttcgcgcgccacgcctccgacggcgcctgcgcgcgc
cgcttcgccgagctgctcatgtcctccggcgtcgtgctcaacccggacatccactgggtc
accttccacagcggctacgacttcgggtacctcctcaagctgctcaccggctcaaccctg
cccgacaccagcgcggggttcttcgacctcatccggatctacttccccgtcgtctacgac
atcaagcacctcatgcgcttctgcaacagcctccacggcggcctcaacaagctcgccgag
ctgctcgacgtcgagcgggtcgggatctgccaccaggcgggatccgactccctgctcacc
gcgctgtcgttcaacaagctcaaggactcctactttggcgggttgaccgagagatacgcc
ggtgtgttgtatggtctaggcacggagggcggggaaaccacctctgttcactga
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