Lolium perenne (perennial ryegrass): 127302224
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Entry
127302224 CDS
T08650
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog A-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
lper03015
mRNA surveillance pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127302224
09122 Translation
03013 Nucleocytoplasmic transport
127302224
03015 mRNA surveillance pathway
127302224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127302224
03041 Spliceosome [BR:
lper03041
]
127302224
03009 Ribosome biogenesis [BR:
lper03009
]
127302224
03012 Translation factors [BR:
lper03012
]
127302224
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127302224
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127302224
mRNA cycle factors
Stress granule specific factors
127302224
Spliceosome [BR:
lper03041
]
Complex C
Other components
EJC/TREX
127302224
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
90S particles
Helicases
127302224
Translation factors [BR:
lper03012
]
Eukaryotic type
Initiation factors
eIF-4
127302224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
AAA_30
Helicase_RecD
AAA
CMS1
Motif
Other DBs
NCBI-GeneID:
127302224
NCBI-ProteinID:
XP_051188601
LinkDB
All DBs
Position
5:232019429..232021707
Genome browser
AA seq
409 aa
AA seq
DB search
MTTSVLSRRGSGGGAMDKNSGPTFEASPDVEVVRSFDQMGIRDDLLRGIYAYGLENPSAV
QMRAILPIISGRDLIAQAQSGTGKTSMISLAACQVIDTTVREVQALILSPTRELATQTEK
FMQAIGQFMSVQVHACVGGNANSIGEDIRKLDHGVHAVSGTPGRVCDMIKRGSLRTRSIK
LLVLDEADEMLNKGFKEHIYDIYRHLPSELQVVLVSATLPNDILEITSKFMTDPVRILVK
RDELTSEGIKQFFVAVEKEEWKFETLCDLYDTLTITQAVIFCNTKRKVDWLTERMRTNNF
TVSAMHGDMPQKERDAIMADFRCGTTRVLITTDMWARGLDVQQVSLVVNYDIPNNRELYI
HRIGRSGRFGRKGVVINFVRKEDICSLRDIEQFYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgacgactagtgtgttgtccaggcgaggctctggcggtggcgccatggacaagaactct
ggccctacgttcgaggcttcgccggacgtcgaggtagtcaggagctttgatcagatgggc
atccgcgatgacctcctccgtggcatctacgcctacggcctcgagaatccgtccgccgtc
cagatgcgggccatcctccccatcatcagcggccgtgacctgatcgcccaggcgcagtcc
ggcaccgggaagacctccatgatctcgctcgcggcctgccaggtcatcgacaccacggtt
cgcgaggtgcaggcactgatattgtcgccaactagagaactggctacacagacagagaaa
ttcatgcaggctattggtcaattcatgagcgtgcaagtccatgcttgtgttggcggcaac
gcaaacagtatcggcgaggacattaggaagctcgaccacggggtgcatgctgtgtcagga
acgccaggcagagtctgtgatatgatcaagagagggtccttgcgtacaagatcaatcaag
ctcctagttttggatgaagcggacgagatgctgaataaagggtttaaggaacatatatat
gatatctacagacatcttccctcggagctccaggttgtcttggtgtccgcaactctgccc
aatgacattttggagataaccagcaagtttatgactgatccagtcaggatccttgtaaag
cgtgatgagttgacttcagagggcatcaaacaattctttgttgctgtcgaaaaagaggaa
tggaagttcgagacgctatgtgatctctacgacacgctgacaatcacccaggccgtaatt
ttctgcaacactaagagaaaggtcgattggttgactgaaaggatgcgcacgaacaatttc
acagtatcggctatgcacggtgacatgcctcagaaggaaagggacgccattatggccgac
ttcaggtgtggcacaactcgcgttctaatcacgacagacatgtgggcgcgagggctggat
gttcagcaggtctctctcgtcgtaaattatgatatcccaaacaatcgtgagctatacatc
caccgcattgggcgatctggacgttttggtcgcaagggtgtggtgatcaattttgtacgc
aaggaggacatctgctcattgagagatattgagcaattctacagcacgcaaattgatgag
atgccaatgaatgtggcggatctgatttga
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