Lolium perenne (perennial ryegrass): 127302469
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Entry
127302469 CDS
T08650
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lper03009
]
127302469
03036 Chromosome and associated proteins [BR:
lper03036
]
127302469
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127302469
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Helicases
127302469
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127302469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
SR-25
CMS1
Motif
Other DBs
NCBI-GeneID:
127302469
NCBI-ProteinID:
XP_051188901
LinkDB
All DBs
Position
5:242362288..242366550
Genome browser
AA seq
702 aa
AA seq
DB search
MPSIAAVPEPMAVDDSASRKARRKQLKAAEAEAAAAAASSGKKEKKDKKRKAKAPSSDDD
EGTSSTSSESDRAAKKAKKEKKDKKAKKVVEDEVMEEEEEVENDGELTASGEEEEEDPAD
PNSLDNFRISEPLKLKLRAKGIKTLFPIQASTFSLLLDGNDLVGRARTGQGKTLAFVLPI
LESLVNGPHKATRRTDYGRPPSILVLLPTRELANQVHADFEYYGGAFGFSTCCAYGGSPY
RPQEMAMRKGVDVVVGTPGRVKDLIVKGTLNLKALKFRVLDEADEMLNMGFVDDVELILG
KVEDVTKVQTLLFSATLPEWVKKLSMRFLKPDKKTVDLVGNEKMKASASVRHLALPCNRA
ARARVIPDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDIAQAQREVVIAGFRS
GKFVVLVATNVAARGLDINDVQLIIQCEPPKDVEAYIHRSGRTGRAGNTGIAVMLFEPRY
KFGLTRIERESGVKFEHVSAPQPSDVAQSAGNEAAEAIASVSDSVIPVFRQQAEELLSSS
SMSAVDLLAKALAKAVGYTDIKKRSLLSSMENCTTLHLSTGSTMYTPSYVISTLKRFMPE
DRLSNVQGVALTSDGRGAVFDVPSEEVQDYLQGAENAAGVTLDEVKELPALQEREQQSRG
GGSRWGGGGGRGGGGRRFGGGGGGRGGFGGRGRGGGGRFGRR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgccttccatcgccgccgtccccgagcccatggccgtcgacgactccgcctccaggaag
gccaggcgcaagcagctcaaggccgccgaggccgaggccgccgccgccgccgcctcctcg
ggcaagaaggagaagaaggacaagaagcgcaaggccaaggcgccctcctcagacgacgac
gagggcaccagcagcaccagctccgagtccgaccgcgcggccaagaaggccaagaaggag
aagaaggacaagaaggccaagaaggtcgttgaagatgaggtgatggaggaggaggaggag
gtggagaacgacggggagctcaccgccagcggcgaggaggaggaggaggaccccgccgac
cccaactcgctcgacaacttccgcatctccgagccgctcaagctcaagctcagggccaag
ggcattaagaccctgttccccatccaggccagcaccttcagcctcctcctcgacggcaac
gacctcgtcggacgcgcgcgcactggacagggcaaaactctggcttttgttctccccata
ctggagtcattggtcaatgggccacacaaggcgaccagaaggactgactacggcaggcct
ccaagtattctggttctgctacccaccagagagctagccaatcaggtgcatgctgacttt
gagtattatggtggagcatttgggttttctacctgctgtgcttatggaggctctccctac
cgtcctcaagagatggcaatgcggaagggggttgacgttgttgttggtacccctggccgt
gtcaaggatttaattgtaaagggaacactcaatttgaaggccttgaagttccgtgtcctt
gatgaagctgatgaaatgcttaacatgggctttgttgacgatgttgagcttattcttggc
aaggttgaggatgtcaccaaagtacagacacttctgttcagtgctactctaccagagtgg
gtaaagaagctctcaatgaggttcctgaaacctgacaagaagactgttgatcttgttggc
aacgagaaaatgaaagctagtgcatctgtcaggcatcttgctcttccttgcaaccgtgct
gcaagggcacgagttatcccagacatcattcgatgctatagccatggagggcgaaccatt
attttcaccgagacaaaagattctgcatcagagctctctggcttgattcctggatcccgt
gccttgcatggagatatcgcgcaagctcagcgtgaagtagttattgctggattcagaagc
ggcaagtttgttgttttggttgctacaaatgtggctgcgaggggtcttgatattaatgat
gtgcagcttatcattcagtgcgagcctccaaaggatgttgaagcttacatccaccggtca
ggtcgcacagggagagcagggaatactggcattgcagtcatgctttttgaacccagatat
aaatttggtttgaccagaatagagagggagtctggggtgaagtttgaacatgtatctgcg
ccgcagcctagcgatgtggcacaatctgctggcaatgaagcagcagaagccattgcaagt
gtgtctgacagtgttattcctgttttccggcaacaagcagaagagctgttaagttcttcc
agcatgtctgcagtcgatctactagccaaagcccttgcaaaggcagttgggtacactgac
ataaagaagagatcgttgctttcttccatggagaactgtactacattacatctttcaact
ggcagtacgatgtatacaccatcgtatgttatttccactttgaagaggttcatgccagaa
gacagactttcaaatgtgcagggtgtagcccttacctctgatgggagaggcgctgtattt
gatgttccttcagaagaggttcaagattatcttcaaggcgctgagaatgcagctggtgtg
acacttgatgaagtgaaggaactgccagccttgcaagagagggagcagcagtcaaggggt
ggcgggtcgaggtggggcggcggtggtggtcgtggcggtggtggcaggagatttgggggt
ggcggcggtggccgaggaggctttggtggaagaggcaggggaggcggtggaaggtttggc
aggaggtga
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