Lolium perenne (perennial ryegrass): 127302631
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Entry
127302631 CDS
T08650
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127302631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127302631
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
127302631
Prokaryotic type
Archaeal type
TFB
127302631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_3
WHD_GDS1
DUF7573
zinc_ribbon_6
RB_B
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-GeneID:
127302631
NCBI-ProteinID:
XP_051189099
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All DBs
Position
5:249590942..249594369
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AA seq
340 aa
AA seq
DB search
MSDIFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGAHGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL
DIRRSPISIAAAVIYMITQLSEDKKPLKGLKRLTHSVLFAYTFGEIILTLVSTHSADISL
ATGVAEGTIRNSYKDLYPYAARLIPNSYAKEEDLKNLCTP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcttctgcccggactgcaagaagcacacggaggtggcgttcgaccactcg
gcgggggacacggtgtgcacggagtgcgggctggtcctggaggcgcactccgtcgacgag
acctccgagtggcgcaccttcgccaacgagtccaacgacaacgaccccgtccgcgtcggc
gggccctccaacccgctgctcaccgacggcggcctctccaccgtcatcgccaagcccaac
ggcgcccacggcgacttcctctcctcctcgctcggccgctggcagaaccgcggctccaac
cccgaccgctccctcatcctcgccttccgcaccatcgccaacatggccgacaggttgggt
cttgtggctactattaaggaccgagccaacgaaatctataagaaggtggaagatctcaag
tctatcaggggaagaaatcaagatgcaatattagctgcttgtctgtatattgcttgcaga
caagaagatcgtcctaggactgtaaaagaaatatgttccgttgccaatggagctacaaag
aaagagattgggcgtgcaaaagaattcattgtgaagcaactggaagttgagatgggccaa
tctatggagatgggaaccatccatgctggagatttcctgaggcgtttctgttcaactctt
gggatgaacaacactgctgtgaaagcagctcaggaggcagttcagcgctcagaggagctt
gatatcaggaggagtcctatttcaattgcggctgctgtcatttatatgataacccagctc
tcagaggacaagaagccacttaaaggtttgaaacgattgacccattctgtccttttcgcc
tacacttttggtgaaataatattaacgctggtatccacgcactctgcagatatctccctg
gctaccggtgtggcagaaggcaccatcaggaattcgtacaaggacctgtatccgtacgct
gcgaggctcatcccgaattcctacgccaaggaggaagacctaaagaacctctgcacaccg
tag
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