Lolium perenne (perennial ryegrass): 127303243
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Entry
127303243 CDS
T08650
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127303243
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127303243
5.6.2.5 RNA 5'-3' helicase
127303243
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127303243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
Temptin_C
Motif
Other DBs
NCBI-GeneID:
127303243
NCBI-ProteinID:
XP_051189959
LinkDB
All DBs
Position
1:complement(81595873..81607167)
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AA seq
1357 aa
AA seq
DB search
MGSRGRMLFDLNELPTEAEEEAAVVLSQPQLPVPNIYPSNLFLQQGVPQTQGILNNYAFK
HASSGSGFQPFVRSKVSNNGDTKENLDATAASTSMATVAHHAETSNQVSQAVEREEGEWS
DADCASDTAGSGVSNKEELAGMANIEVKGESLERESATVKSADVIKDDAAADPSDTEMVD
VSKDPLLRAPTGPESTKNSECKGNQSGDDLDQGNKLKDVKGVEASYALKFTNNPAKRPKL
DEHKVAMLGKKRARQTVFINVEDAKQAGTMKTITPRRQSSFPAPIVTRTVKEGSRGVGER
ATEKPSQPVVRDQKQSELIGSERSNSADPSDQNGEPNGDVELGSHGRSKKMNAEEPPSDC
YQQSVPRQASSKQPMDPKQFKSRPVSSQRAVLTGQNTADQKTANKRSLVPKRQASGSNTQ
YNDSSVERLIREVTNDKFWHNPEEEELQCVPGSFDSAEEYIKVFEPLLFEECRAQLYSSY
EESLEAASRDAHVMVRVKSVDRRERGWYDVIVLPTHEYKWTFKEGEVAILSFPRPSSAAQ
SSRSNRKTAPSVEDAEAESGRLVGTVRRHMPIDTREPIGAIIHFYVGDSFDSSSEANVLK
KLQPRSTWYLTGLGSLATTQREYVALHAFRRLNVQMQNAILQPSPEHFPKYQEQPPAMPD
CFTPSFSDHINRTFNGPQLSAIHWAAMHTAAGTSNGVVKKQEPWPFTLVQGPPGTGKTHT
VWGMLNVIHLVQYQYYYAALLKKLAPESYKQVSSTTNSTSETFAAGSIDEVLQSMDQNLF
RTLPKLCPKPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGVDTQSRAAQA
VSVERRTEQLLMKGRDEVIGWLQQLKGREQQLSQEIGLLQRELNMVAVSGRSQGSVGVDP
EVLAHRDRNRDILLQKLAASVESRDKVLVEMSRLLILEGKFRVGGNFNLEDARSSLEASF
ANEAEIVFTTVSSSGRRLFSRLSHGFDMVVIDEAAQASEVGVLPPLALGAARCVLVGDPQ
QLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIRDFPSRYFYQGRLTDS
ETVVKLPDESYYKDALMSPYIFYDISHGRESHRGGSSSYQNVHEAQFALRLYEHLQKLVK
ANGGKKASVGIITPYKLQLKCLQREFEEVMNTEEGKDIYINTVDAFQGQERDVIIMSCVR
ASNHGVGFVADIRRMNVALTRARRALWVVGNANALVQSEDWAALVADAKARKCFIDLDSI
PKDFLAMKVSSNTPGRNSSNNTRNMRAGGPRPRHLDMLPDSRIGMRSDDDERVNSVSRNA
SNRNLDDLGRPGDRSRENLQFGLPRRPNSSNGSRREV
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgaggaaggatgttatttgacctcaatgagctcccaacagaagctgaagaa
gaagctgcggttgttttgtcccaacctcaacttcctgttcccaatatatatccctcaaat
ttgtttctccaacagggagtgccccagacacaagggattttgaacaattatgcctttaag
catgcatcttcaggttcaggttttcaaccttttgtgagaagcaaagtttctaacaatgga
gacacaaaggagaatttggatgctactgccgcttctacatctatggcaacagttgctcat
catgctgagacctccaatcaggtttcgcaagcagttgaaagagaagagggtgagtggtct
gatgcagattgtgcttctgacaccgcaggaagtggtgttagcaacaaagaagagttggct
ggtatggcaaatattgaagtgaaaggagaatccctggagagagaatctgctactgtaaaa
tctgctgacgtgattaaagatgacgctgctgctgatcctagtgacactgaaatggttgac
gtgtctaaggatccattgttacgtgctcctacaggacctgagagcacaaaaaattctgaa
tgtaaaggaaatcaatccggggatgatttagaccagggcaacaaattaaaggatgtcaaa
ggagtagaagccagttatgcattgaagtttacaaacaaccctgcaaagagacctaagcta
gatgaacacaaagtagcaatgctcggtaaaaagcgggccaggcagactgtgttcatcaat
gttgaggatgcaaaacaagctggcacaatgaagacaataacaccaaggaggcaatcatct
tttccagcaccaattgttacacgtactgtgaaggaaggttctcgtggtgttggtgaaaga
gctacagaaaaaccgagccaaccagttgtccgagaccaaaaacagtctgaattgattggt
tcagaaagaagtaattctgcagatccaagtgaccaaaatggcgaacccaatggtgatgtt
gagttgggatctcatggcaggtcaaagaaaatgaatgctgaagaacccccctcagattgc
tatcaacaatctgtgccacggcaggcttcttcaaagcaacccatggatcccaagcagttc
aagagcagaccagtatcttctcagagagcagttctaacaggacaaaataccgcagaccag
aaaacagccaacaaaaggtctctcgttcccaaaagacaagcttcaggaagtaacacacag
tacaatgactcatctgtcgaacgactcataagggaagtgacaaatgacaagttctggcat
aatccagaagaggaagaacttcagtgtgttcctggaagctttgattctgctgaggagtac
attaaagtatttgagcctttgctttttgaggaatgcagagctcagctatatagttcctac
gaggagagtctcgaggctgcatcaagggatgcacatgtaatggtgcgtgtgaaaagtgtg
gataggcgtgaaagaggatggtatgatgtcattgttctaccaacacatgaatataaatgg
actttcaaagaaggtgaagttgcaattttgtcattcccacggcctagttcagcagcccag
tctagtagatctaatcggaagaccgctccttcagttgaagacgctgaagcagaaagtgga
cggcttgtaggtacagtcaggcgccatatgcctattgatacacgcgaacctattggggcg
attattcatttttatgttggggattcatttgattctagcagcgaggctaatgttctgaag
aaactccaacctcggagtacctggtatttaaccggtcttggttctcttgcaacaacacag
agggaatatgtagcattgcatgctttccgacgccttaatgtgcagatgcaaaacgcaatt
cttcaaccgagtccagagcacttccccaagtatcaagagcagccacctgctatgcctgac
tgtttcacgccaagtttttctgaccatatcaatcgtactttcaatgggcctcagctatcg
gcgattcactgggctgcaatgcacacagctgctggtacaagcaatggagtggttaagaaa
caagaaccatggcctttcacattagtacaaggccctcctgggacagggaaaacccacact
gtctggggaatgttaaatgttattcatcttgttcagtatcaatattattatgctgctctg
ctgaagaaacttgctcctgaaagttacaagcaagttagtagtaccactaacagtacttca
gagacttttgctgcggggtctattgacgaagttttacagagcatggatcagaacctcttt
cgcactcttcccaagctttgccccaaaccacggatgcttgtctgtgccccatcaaatgct
gcaacagatgagttgctttctcgtgtactagaccgaggtttcatagatggtgagatgaag
gtctaccgccctgatgttgctcgtgttggagttgatacacaatctcgtgctgcccaagct
gtttcagttgagcgacggacggaacaacttttgatgaagggccgtgatgaagtaattggt
tggttacaacagctaaaaggccgtgagcagcagctatcacaagagatagggcttctacag
agggaacttaatatggtggcagtgtctggtagatcccagggttcagttggggttgatcct
gaagtgcttgctcacagagatcgtaaccgtgatattctccttcagaaacttgcggcctct
gtagaaagcagggataaagtactggtagagatgtcgcggctgctgatattagaaggcaag
ttccgtgttggtggtaacttcaatctggaagatgctaggtctagtctggaagccagtttt
gccaacgaagctgaaattgtttttacaacagtgtcaagcagtggtcgcaggttattttct
cgtcttagtcatggttttgatatggttgttattgatgaggctgctcaggccagtgaagta
ggagtcctccctccacttgcacttggtgctgctagatgtgtcttggttggcgatcctcag
cagctgcctgccactgttataagcaaagcggctggaactttactctatagcaggagcctg
tttgagaggtttcagcaggctggctgccctaccattttgttgtctgtgcaatatcggatg
catccccagatccgtgattttccatcaagatacttctatcaagggcgtcttacagacagt
gaaactgttgtcaaattgcctgatgaatcatattacaaagatgcattaatgtcaccttac
attttctatgacatctcgcatggccgtgagtctcatagaggtggctcatcttcataccag
aatgttcatgaagcacagtttgcattgcgtttgtatgagcatcttcagaagctggtgaaa
gctaatggtggcaagaaagcatctgttggtataatcactccttataagttgcagttaaag
tgtctacaaagggaatttgaagaggttatgaataccgaggaagggaaagatatctacata
aacacagttgatgctttccaaggtcaggagcgtgatgtgattatcatgtcatgtgtccgt
gcttcaaaccatggcgtggggtttgttgcagatatacggcgtatgaatgttgctcttact
cgagctaggagagctctatgggttgttggtaatgccaatgctcttgtgcagtcagaggac
tgggcagcactggtagcagatgcgaaggccaggaaatgtttcatcgacttggatagcatc
ccgaaggacttcctagccatgaaggtttcttccaacactccaggaaggaactcttcaaac
aacacaaggaacatgagggctggtggaccgagaccgaggcatctggatatgcttccagac
tcaaggattggcatgaggtctgatgatgatgagcgtgtcaactccgtttcaagaaatgct
agtaaccgcaatttggatgacctggggcgccctggtgatagatctagggaaaatttgcag
ttcggattgccaaggagaccgaattcatcgaatggttcgaggagagaagtctga
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integrated database retrieval system
