Lolium perenne (perennial ryegrass): 127303594
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Entry
127303594 CDS
T08650
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127303594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127303594
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
127303594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ELL
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
127303594
NCBI-ProteinID:
XP_051190269
LinkDB
All DBs
Position
1:complement(83002679..83011137)
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AA seq
534 aa
AA seq
DB search
MGSVDLVLKPACEGCGSPSDLYGTGCKHTTLCSSCGKKMALSRARCLVCSAPITNLIREY
NVRANATTDKSFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQLTDKMLEKYNRKPWI
LEDETGQYQFQGHMEGSQSATATYYLLMLHGKEFHAFPAGNWYNFSKVAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAATNGPAAFGSDMKKLEPTNDGEKEGARPKKGKDNEDGNNS
DKGEENEEEEADRKDRLGLSKRGMDDDEEGGKDLDFDLDDDIEKGDDWEHEETFTDDDEA
VDIDPEERADLAPEIPAPPEIKQDDDDNEEEEGGLSKSGKELKKLLGRASGQNESDADED
DEDDDQDDESSPVLAPKQKDQPKDEPVDNSPAKPTPSSGHARSTPPASKSKQKRKLGGDD
AKTSGGTASKKVKVESDTKPSGIKEEAPSSSKPTSKATASSKTASANVSPVTEDEIRTVL
LAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVLREDKK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgtagacctggtgctgaagccggcgtgcgagggctgcggctccccatcggac
ctctacggcaccgggtgcaagcacaccacgctctgcagctcatgcggcaagaaaatggcg
ctctcccgcgctcggtgcctcgtctgctccgctcccatcaccaacctaatccgggaatac
aatgtacgggcgaatgctaccacagataagtcattctctattggaagatttgtcactggt
ttaccacctttctcaaagaaaaagaatgctgagaacaaatggtctcttcataaagaaggc
ctacaagggcgacagcttactgataaaatgctggagaaatacaacaggaagccatggatt
ttggaagatgaaactggtcagtatcagtttcaaggtcatatggagggatcacagtcagca
acagctacgtactatttattgatgttgcatggcaaggaattccatgcatttcctgctggc
aactggtataacttcagtaaagttgcacagtacaaacaactgactctggaagaggctgag
gagaagatgaataagagaaagactagtgcaactggttatgaacgttggatgatgaaggca
gctacgaatggcccagctgccttcggttctgatatgaaaaaacttgagcctactaatgat
ggagaaaaagaaggtgctcgtcctaagaagggaaaagacaatgaggacggtaataattct
gataaaggtgaggagaatgaagaagaggaagctgatcgcaaagataggcttgggctctct
aagaggggcatggatgacgacgaggaaggtggaaaagatttagattttgatttggatgat
gacattgagaaaggggatgactgggagcatgaagaaacattcactgatgatgatgaggct
gtggatatcgacccagaggagcgggcagatttagctcctgaaattcctgctccacctgaa
attaagcaggatgatgatgacaatgaagaagaagaaggtggtttgagcaagtcaggaaag
gaattaaagaagttgcttgggcgtgcttctggacaaaatgagtcagacgccgatgaggat
gatgaagacgatgatcaggacgatgagtcatccccagtgcttgctcctaagcagaaggat
caaccgaaagatgaacctgttgacaacagcccagctaaacccacaccttcatcaggacat
gcccgtagcacgcctcctgcatcaaaatccaaacaaaagaggaaattgggtggtgatgat
gcaaaaacatctggcggtacagcttcaaagaaagtaaaggtggaatctgacaccaaacca
tcaggcatcaaggaggaggcaccatcttcctcgaaacctacatcaaaggccacggcttcc
tcaaaaactgccagtgccaatgtatctcctgtgacagaggatgagatcaggactgttctt
cttgcagtggctccagtcactacacaagatttagtatccagatttaagtctagactacga
ggtccagaggacaagaatgcatttgctgaaattctgaagaaaatttcgaagatacagaaa
acgaatggccacaactacgtcgtccttagagaggataagaaatga
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