KEGG   Lolium perenne (perennial ryegrass): 127304336
Entry
127304336         CDS       T08650                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03082  ATP-dependent chromatin remodeling
lper03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127304336
   03083 Polycomb repressive complex
    127304336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lper03036]
    127304336
Chromosome and associated proteins [BR:lper03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     127304336
  Histone modification proteins
   HAT complexes
    HATB complex
     127304336
   HDAC complexes
    Sin3A-HDAC complex
     127304336
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     127304336
    PRC2.2
     127304336
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     127304336
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127304336
  Chromatin remodeling factors
   NuRD complex
    127304336
   NuRF complex
    127304336
   NuRF complex (fruit fly)
    127304336
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 CAF1C_H4-bd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_SCAP NBCH_WD40 WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 MIOS_WD40 WDR90_beta-prop_4th RMC1_N
Other DBs
NCBI-GeneID: 127304336
NCBI-ProteinID: XP_071676557
LinkDB
Position
5:252869473..252874442
AA seq 400 aa
MDGGSSFPAAAAAAAMETEEHLNWKKNAPVLYDLVISHPLEWPSLTVQWLPSGSPAAARS
HQLVLGTHAEDAPNHLMLVDAVLPLPPRLAAAAAAEGATLPAPSVSIFRSAPHQGEVNRA
RCMPQRPYTVATKTCVDEVHVYHLADDGHKVGADVVLRGHGAEGYGLAWSPMKEGWLLSG
SYDKKICLWDLKSGSGAPVLDAQQVFEAHEDMVEDVAWHLKDDNLFGSVGDDCKLMIWDL
RTNKAEQSVVAHQKEVNSLSFNPFNEWILATASGDATIKLFDLRKLSRSLHTFDSHEGEV
FQVEWNPNLETVLASHAADKRVMIWDVSRIGDEQAEEDASDGPPELLFVHGGHTAKISEL
SWNPSEKWVVASVAEDNVLQIWEMAESIYSDDSNASSLST
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggacggcggctcctccttcccggccgccgccgccgccgccgcgatggagacggaggag
cacctgaactggaagaagaacgcgccggtgctctacgacctcgtcatctcccacccgctg
gagtggccctcgctcaccgtccagtggctcccgtcggggtccccggccgccgcccgctct
caccagctcgtcctcggcacccacgccgaagacgcccccaaccacctcatgctcgtggac
gccgtcctcccgcttcctccgcgcctggccgcggcggcggccgccgagggcgccacgctc
ccggccccctccgtgtccatcttccgctcggcgccgcaccagggcgaggtcaaccgcgcc
cgttgcatgccgcagaggccgtataccgtggccaccaagacctgcgtcgatgaggtgcac
gtgtaccacctcgccgacgacggccacaaggtcggcgccgatgtcgtgctcaggggccat
ggcgccgaggggtacgggctggcgtggagcccgatgaaggaggggtggctgctgagcggc
tcgtacgataagaagatctgcctgtgggatctcaagtccgggagtggagccccggttctg
gatgcgcaacaggtgtttgaggctcacgaggatatggttgaagatgtagcttggcacctg
aaagacgacaacctatttggttctgttggcgatgactgcaagctcatgatttgggacttg
cgtacgaacaaagcagaacaatctgtagtagcacaccagaaggaagttaactccttgtcc
ttcaatccatttaacgaatggatcttggctacagcatctggcgatgcaactattaagctg
tttgacttgcgaaagctatcaagaagcttgcatacattcgacagccatgagggggaggtt
ttccaggttgagtggaatccgaacttggagactgtattggcttcccatgctgcagacaaa
agggtgatgatatgggacgttagcaggatcggagatgagcaggcggaggaagatgcaagc
gatggaccaccggagctgctcttcgtccacggtggtcacacagcgaagatctcggaactg
tcctggaaccctagcgagaaatgggttgtggccagcgtggcggaggataacgtgctgcag
atctgggagatggcagagagcatatactccgatgacagcaacgcctcttccctgtccaca
taa

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