Lolium perenne (perennial ryegrass): 127304336
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Entry
127304336 CDS
T08650
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
lper03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127304336
03083 Polycomb repressive complex
127304336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lper03036
]
127304336
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127304336
Histone modification proteins
HAT complexes
HATB complex
127304336
HDAC complexes
Sin3A-HDAC complex
127304336
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127304336
PRC2.2
127304336
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127304336
Heterochromatin formation proteins
Other heterochromatin formation proteins
127304336
Chromatin remodeling factors
NuRD complex
127304336
NuRF complex
127304336
NuRF complex (fruit fly)
127304336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
NBCH_WD40
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
MIOS_WD40
WDR90_beta-prop_4th
RMC1_N
Motif
Other DBs
NCBI-GeneID:
127304336
NCBI-ProteinID:
XP_071676557
LinkDB
All DBs
Position
5:252869473..252874442
Genome browser
AA seq
400 aa
AA seq
DB search
MDGGSSFPAAAAAAAMETEEHLNWKKNAPVLYDLVISHPLEWPSLTVQWLPSGSPAAARS
HQLVLGTHAEDAPNHLMLVDAVLPLPPRLAAAAAAEGATLPAPSVSIFRSAPHQGEVNRA
RCMPQRPYTVATKTCVDEVHVYHLADDGHKVGADVVLRGHGAEGYGLAWSPMKEGWLLSG
SYDKKICLWDLKSGSGAPVLDAQQVFEAHEDMVEDVAWHLKDDNLFGSVGDDCKLMIWDL
RTNKAEQSVVAHQKEVNSLSFNPFNEWILATASGDATIKLFDLRKLSRSLHTFDSHEGEV
FQVEWNPNLETVLASHAADKRVMIWDVSRIGDEQAEEDASDGPPELLFVHGGHTAKISEL
SWNPSEKWVVASVAEDNVLQIWEMAESIYSDDSNASSLST
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggctcctccttcccggccgccgccgccgccgccgcgatggagacggaggag
cacctgaactggaagaagaacgcgccggtgctctacgacctcgtcatctcccacccgctg
gagtggccctcgctcaccgtccagtggctcccgtcggggtccccggccgccgcccgctct
caccagctcgtcctcggcacccacgccgaagacgcccccaaccacctcatgctcgtggac
gccgtcctcccgcttcctccgcgcctggccgcggcggcggccgccgagggcgccacgctc
ccggccccctccgtgtccatcttccgctcggcgccgcaccagggcgaggtcaaccgcgcc
cgttgcatgccgcagaggccgtataccgtggccaccaagacctgcgtcgatgaggtgcac
gtgtaccacctcgccgacgacggccacaaggtcggcgccgatgtcgtgctcaggggccat
ggcgccgaggggtacgggctggcgtggagcccgatgaaggaggggtggctgctgagcggc
tcgtacgataagaagatctgcctgtgggatctcaagtccgggagtggagccccggttctg
gatgcgcaacaggtgtttgaggctcacgaggatatggttgaagatgtagcttggcacctg
aaagacgacaacctatttggttctgttggcgatgactgcaagctcatgatttgggacttg
cgtacgaacaaagcagaacaatctgtagtagcacaccagaaggaagttaactccttgtcc
ttcaatccatttaacgaatggatcttggctacagcatctggcgatgcaactattaagctg
tttgacttgcgaaagctatcaagaagcttgcatacattcgacagccatgagggggaggtt
ttccaggttgagtggaatccgaacttggagactgtattggcttcccatgctgcagacaaa
agggtgatgatatgggacgttagcaggatcggagatgagcaggcggaggaagatgcaagc
gatggaccaccggagctgctcttcgtccacggtggtcacacagcgaagatctcggaactg
tcctggaaccctagcgagaaatgggttgtggccagcgtggcggaggataacgtgctgcag
atctgggagatggcagagagcatatactccgatgacagcaacgcctcttccctgtccaca
taa
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integrated database retrieval system