Lolium perenne (perennial ryegrass): 127304664
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Entry
127304664 CDS
T08650
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127304664
Spliceosome [BR:
lper03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127304664
Other components
Complex C specific factors
127304664
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GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Suc_Porlyase_C
Motif
Other DBs
NCBI-GeneID:
127304664
NCBI-ProteinID:
XP_051191242
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All DBs
Position
5:60620157..60622349
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AA seq
714 aa
AA seq
DB search
MGSDAGSDAFRGKRRREEPHQFLSSAGQGTTSKRRKPDSTGDDGSMESKYGAAASRMMAN
MGFKPGTGLGKDGQGIVAPLEGVSRPAHAGLGSVQEHRPFFHGKENLPPPPPALAEEEQE
PPRWSRKAGAARKSPAPVLVLSKSALLTTRAEQDEQVQPMVVDRVIDMRGPEPRVLTDLT
GLNDEQEMEVDEDRPMPELQYNLRVLVDQAAAGIRCLDEQLQREKEDVAGLMREKNRLAE
QEASHGHELRVMEAITGALEQVRADEAAGVLTPEALLDTFRELKTRHEEVFDLCGLAWIA
CEFVRPLLVRAFHGWQPLHDPSFGLEVMSPWKDFLLQQQQRRYDFSSDCTDPYAQLVHEV
ILPVVRASGTNSWDARDPEPMLRFLESWEELLPPAVLESTLQDVIMPKLTAAIDSWDREN
VPIHAWVHPWLPILGQTRTETLCHSVRYKLSTGILRSWQSHDASAYAALSPWKGVFDPAS
WEAMITRYIVPKLKLALQELQVSPAVNSQEPEQFNDQLMIWASATSASHMIHLLEVEFFS
KWLLVLYHWLRSTDPNFDEVVYWYKSWRGILPPELIAHRRVRMLLAAGLVMMDNAAEGRE
VLPPGAAREAVGCPEAAEDRQFDAAQGAPQQVPGGAAMEDLSFKDRILAYAEGHGLKFTP
RPGKFYNGVPVYEFGCVRVCLDSVKGLLYAQDQGSWSSVTLAQLMEMNRMATPC
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggatcggacgccggctccgacgcgttccgcggcaagcgccggcgagaggaaccccac
caattcctctcctccgcgggccaagggacgacctccaagaggaggaaacccgactccact
ggggatgacgggagcatggagtccaagtacggcgcggccgcgtccaggatgatggccaac
atggggttcaagcccggcacgggcctcggcaaggacggccaggggatcgtcgcgccgctg
gagggcgtctcgcgccccgcccacgccgggctcggcagcgtccaggagcacaggcccttc
ttccacggcaaggagaatctgccgccgccgcccccggcgctcgccgaggaggaacaggaa
ccgccacggtggtccaggaaggccggcgctgcgaggaagagtcctgctcctgtccttgtc
ctgtcgaagagcgcgctgctgacgacgcgtgccgagcaggacgagcaagtacagcccatg
gttgtggacagggtgatcgacatgcgaggcccagagccgcgcgtgctgacggacctcaca
gggctcaacgacgaacaagagatggaggtcgatgaagaccggccgatgccggagctgcag
tacaatctccgggtgctcgtcgaccaggccgcggccggcatcaggtgcctggacgagcag
ctgcagcgggagaaggaggacgtggccggcctgatgcgtgagaaaaacagactggcagag
caggaggcttcgcacgggcacgagctccgggtcatggaggccatcaccggggctctcgag
caggtccgggcggacgaggcggccggcgtgctcactccggaagccctgctcgacaccttc
cgggaactgaagacgcgccacgaggaagtgttcgacctctgcggcctcgcatggatcgcc
tgcgagttcgtgcgtcccctgctggtcagggcgttccatgggtggcagccgctgcacgat
ccctcgttcgggttggaggtcatgtcaccatggaaggattttcttcttcagcagcagcag
cggcggtacgatttcagctcagattgcacagatccatacgctcagctggttcatgaagtg
attctgccggtcgtcagagcatctggtactaactcatgggatgctcgagatcccgagccg
atgctccggtttcttgagtcgtgggaagagctgctgcctccggctgtgcttgaatcaaca
ttgcaggatgtgatcatgccgaagctcaccgccgccatcgactcttgggatcgtgagaat
gtgccgatccatgcgtgggtgcacccatggctgccgattctgggccaaaccaggacagag
accctgtgccattctgttcggtacaagctgagcacaggcatcctccgctcatggcaatca
cacgacgcatcagcctacgccgccctatctccatggaagggcgtgtttgatccggcgagc
tgggaagccatgatcacgcgatacatcgttcccaagctgaagctggcactgcaggagttg
caggtcagcccggctgttaatagccaggagcccgaacagttcaacgaccagctgatgatc
tgggcctctgctacctcggcgagccatatgatccatttgttggaggtggaattcttcagc
aaatggctactggttctctaccattggctgcgttccacggatcctaattttgacgaggtc
gtgtactggtacaagagctggagggggattttaccaccagagttgatcgcacatcgtcgt
gtacggatgcttctggctgctggccttgtcatgatggacaatgccgccgaagggcgtgag
gtgttgccgcctggggcggcaagggaggctgtgggctgtccggaagcagcagaggatcga
caattcgatgcggcgcaaggagcacctcaacaagtgccaggaggagcagccatggaggat
ttgagtttcaaggaccgcatcttggcgtatgcagagggacacggcttgaagtttacgccc
agacctggcaagttctacaatggtgttccggtgtatgagtttggctgcgtaagagtctgc
ctagactcggtgaaggggctgctttatgcgcaagatcaaggatcatggagttctgtgact
cttgcgcaattgatggagatgaaccggatggcaacaccatgctaa
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