Lolium perenne (perennial ryegrass): 127305144
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Entry
127305144 CDS
T08650
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
127305144
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lper01001
]
127305144
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lper04131
]
127305144
Enzymes [BR:
lper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
127305144
Protein kinases [BR:
lper01001
]
Serine/threonine kinases: Other
VPS15 family
127305144
Membrane trafficking [BR:
lper04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127305144
Autophagy
Autophagosome formation proteins
PI3K complex
127305144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WDR55
Beta-prop_WDR3_2nd
EIF3I
HEAT
WD40_WDHD1_1st
Beta-prop_TEP1_C
PK_Tyr_Ser-Thr
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_TEP1_2nd
PPP2R1A-like_HEAT
PEP5_VPS11_N
APH
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Kinase-like
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Tti2
Cohesin_HEAT
DUF7691
NBCH_WD40
HEAT_GCN1
Beta-prop_HPS5
Beta-prop_Vps41
TCAD9
UCR_14kD
Motif
Other DBs
NCBI-GeneID:
127305144
NCBI-ProteinID:
XP_051191481
LinkDB
All DBs
Position
6:complement(251484061..251492018)
Genome browser
AA seq
1447 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRGRFLKSVLCKHDEGLLLVKVYFKRA
GEPLDLKEHERRLERIRRAFQGLEGSHVLPFQIWFQTDKAAYLLRQYFYSNLHDRLSTRP
FLSQIEKKWLAFQLIHAVEQSHSKGVCHGDIKCENVLVTSWNWLYLTDFASFKPTYIPDD
DPSDFSFFFDTGGRRRCYLAPERLHEHGGESQVSADAPLQRSMDIFSLGCVLAELFLEGQ
PLFELSQLLAYRRGQYDPMHTLEKIQDAGIQDMVLHMIQLDPKERLSCKSYLQKYETVVF
PTYFSRLHNFFSDIVPLGSDARVEKTQENFERIHDMMISGLTGEQNQVSGKEDIGGQVTN
SPRESAKSASLVKRNIPGDHHQIAGDLNLLLKEVEQRNVHGGTKSYAASNVSRANGIGPS
QQVNQTQSQTTSVLAAQSNDVSHVHKISKSNLLALVSGYDAQSDTYSFDIFQQTHSKVSC
EGMVLLASLICSSIRSVKKPELRRAGLILLKISSTYIDDDSRLQLVIPYVIAMLSDPAAI
VRCAALETLSDVLCLVQDFPISDAMIFPEYILPMLSLLPDDTEESVRVCYASNIYKLALT
AYRFLLRSRSITDAGPLDKSVVAAGSQSAEAPLKKKHDKIDRQLARLRKSIYDIVQELVM
GPKQTPNVRRALLQDIGYLCYFFGHRQSNDFLLPILPAFLNDHDEQLRAVYFGQIVVVCY
FIGSRSVEEYLLPYLEQALSDDMEAVVVNVLDCLTMMCESRYLRKRVIVGLFGKALPLLC
HPIQWVKRSAVRLIAACSESLGPVDTYVYLSPHLRHFLHREPPSLSEAALLACLKPPVSK
AVLYQALEVTKDTGNVLLKGDGKKEQTLPGGKYPATTQSGPSATLEDAVRLRTSNLSGNV
SLDIKDSISSDKSLYYGYAPHASTVSSSFYDGLSKGIPSYSVTTDKRGLGEIFMPWESNR
HPGLSSSVQGLQTRENHFSSRHGDLSISDSMKSSLSVPGDGVSNSETAVSPSFTRSAVAL
ETGWKPRGVLVAHLQEHRLSVNDIAVSDDNTFFVTASDDSSVKIWDTRKLEKDIAFRSRL
TYNLGSSQALCTTMLSGSSQVVVGDSDGALHLFSVDCARGVGSVAERYSGIVNVKRKDLK
EGAILSVANCSSDSFSPTILFSTEHCDIHKWDARTNSESWSFKSSPEEGYISALVMGQCG
NWFISGSSRGVLTLWDHRFLLPVNSWNYSTVTPIEKLCLLIPPHNSISSAGRPLVFVAAG
YNEVSLWNAENGSCHQMFRTASIENEAVMPKTPSRPVNKTNAKDIRRAGSYKYRIEELSS
PPPRLPGIRCLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCIAGPSAKGVGNDECYDIKS
SYGVQVVQEACKQPTPSSRLTHKTQLAMAAADSAGCHRDAILALASVNLSSQRLISASRD
GAVKVWK
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcggacgacgcaggcgtccgcgaccgagtactacctgcacgac
ctgccctccacctacaacctcgtgctgctcgacgtcgtctcccgcggccgcttcctcaag
tccgtcctctgcaagcacgacgagggcctcctcctcgtcaaggtctacttcaagcgcgca
ggcgagccgctcgacctcaaggagcatgagcggaggctggagcggatccggagggccttc
caggggctcgagggctcccacgtcctgcccttccagatctggtttcaaacggacaaggca
gcatatctcctgaggcagtacttctacagcaatctgcacgatagacttagcacgcgccct
ttcctcagtcaaatagagaaaaaatggcttgcttttcagttaatccatgccgtggagcag
agccatagtaagggagtttgccatggtgacatcaaatgtgagaatgtactcgtgacctca
tggaattggctctacctcacggactttgcgtcttttaagccaacatacatcccagatgat
gatccatctgatttttccttcttctttgacactggaggaaggcgaagatgctatctagca
cctgagagattacatgaacatggtggtgagtcccaggtttcagcagatgcgcctttgcaa
cgttctatggacatattttctctcgggtgtgttcttgctgaacttttcttggaaggtcag
cccctctttgagctttcacaacttctcgcttatcggcgtggccagtatgaccctatgcat
accctagaaaagatacaagatgctggtatccaagacatggtacttcacatgattcaatta
gaccccaaagaaaggctatcatgtaaaagctatctgcaaaaatatgaaactgtcgttttt
ccaacctatttttcaagattgcacaacttcttctcggatattgttccacttggctcagat
gctagggttgagaagacacaggaaaattttgaaaggatacatgacatgatgataagtggc
ttaacaggtgaacaaaatcaagtatctgggaaggaagacattggaggacaagttacaaac
tcaccgagagaatctgccaaaagtgcatccttagttaagagaaacattcctggagaccat
catcagatcgctggagatctcaatctccttctcaaggaagtggagcaaaggaacgtccat
ggaggcacaaaaagttatgctgcttcaaatgtttcacgtgcaaatggtattgggccctcg
cagcaggttaatcaaactcaaagtcaaactacaagtgtcttggcggcccagagcaatgat
gtatcccatgtgcacaagatatccaagagtaacttgcttgctttagtgtctggttatgat
gcccaatcggatacctatagttttgacattttccaacagacacattccaaggtgagctgt
gaaggcatggtcttgcttgcctcattaatctgctcgtccatacgaagtgtcaaaaaacca
gaactaagaagggccggtctcatccttctgaagatttcttccacatacatagatgacgat
agtcgcttgcagctggttattccctatgttattgcaatgctttcagatcccgctgccata
gttcgctgcgctgctttggaaaccttgtctgatgttctctgtcttgttcaagacttccct
atcagtgatgcaatgatcttccctgagtacatcctcccaatgctctctttgctcccagat
gatacagaggagagtgtcagagtttgctatgccagtaacatttataagctagctttaaca
gcttatagattcttgcttcgttctcggagcataactgatgctgggcctctagacaaatca
gtggttgctgctggatcacagtctgcagaagcaccactgaagaagaagcatgataaaatt
gatcggcaacttgcacgtctgaggaaaagtatttatgacatagtgcaagagttggtaatg
ggaccaaagcagacacctaatgtccgcagagctctcctgcaggatataggttatctatgt
tacttttttgggcacagacaaagtaatgattttcttcttcctatacttccagcatttctg
aatgaccatgatgagcagctccgtgcagtttactttggtcaaattgtcgttgtttgctac
ttcattggttcaagaagtgttgaggaatatcttttgccctatcttgaacaggcactaagt
gacgatatggaagctgtggttgtaaacgtacttgactgcttaaccatgatgtgtgaaagt
cgttacttgaggaaaagggtaatcgttggcttatttgggaaggcccttcctctactatgt
catccaattcaatgggttaaacggtctgctgtaaggcttattgctgcttgtagcgagagc
ttagggcctgtagatacttatgtgtacctttctccacatctaaggcattttctacacagg
gagccaccttcattgtctgaagctgctcttcttgcatgtcttaagcctccagtctcgaaa
gcagtcttataccaagctttagaggttaccaaggacacaggaaacgttttactgaagggt
gatggtaaaaaagaacagacattacctggtggaaaatatcctgctacgacacaaagtggg
ccctctgccactctggaagatgctgtaaggttgagaacatctaatttgtctggcaatgtg
tctttggacatcaaagattcaatttcttcagataaatcgttatattatggctacgcacca
catgcatctactgtgagcagttcattttatgatggattgtctaagggaattccatcatat
tcggttaccactgataagcgtggtttaggagaaatatttatgccctgggaatccaaccgg
catccaggtttatcaagttcagttcaaggcctccaaactagagagaatcatttcagtagc
aggcatggtgatttaagcatcagtgactcaatgaagagcagcttgtctgtgccaggtgat
ggcgtctccaactctgagactgcagtgtcgccctccttcaccagatcagcagtggctctg
gagacaggttggaagcctcgtggagttctagtggcacatctccaagaacatcggttgtct
gtcaatgatattgcggtgtcagatgacaacaccttttttgtgacggcttcggatgactca
agtgttaagatatgggatacaagaaagttggaaaaggacattgccttcagatcaaggttg
acatataacttgggtagtagccaagctctatgtacaacaatgctttctggcagttcacag
gttgttgttggtgatagcgatggcgcattgcacttgttttctgttgactgtgcacgcggt
gttgggagtgttgcagagaggtattctggcatcgttaacgtaaaaaggaaagatctgaaa
gaaggtgctattctcagtgttgcaaattgttcatcggacagctttagcccaaccatccta
ttcagcactgaacattgtgacatccataaatgggatgcaaggaccaattcagaatcttgg
tcatttaaatcctcaccggaggagggctatatctcagcgcttgtgatgggccagtgtgga
aattggttcatctcagggtcttcaagaggtgttcttacgttgtgggatcataggtttttg
cttcctgtcaactcatggaactattccacagtaacccctatagagaaattgtgcttgctt
ataccaccacacaactcaatatcttctgctggaagaccactggtttttgtggccgcaggc
tacaatgaagtttccttgtggaatgctgagaatggtagctgccaccagatgtttaggaca
gcaagcatcgagaatgaggctgttatgccgaagacaccatcaagacctgttaacaagaca
aacgccaaagacataaggcgagcgggaagctacaaatacagaattgaggaattatctagt
ccgcctccacgccttccaggcatccgttgcttgcttcctttgccagggggagatctgttg
actggaggaacagatttgaagatacgctactgggaccaggccagacctgagcaaagcttc
tgcattgctggcccttcagcgaaaggagttggaaatgacgagtgctatgatataaaatcc
agctacggtgtacaggttgtacaggaagcgtgcaagcagcctacgccatcatccaggttg
acgcacaagacgcagctcgcgatggctgccgccgattctgctggctgccaccgggacgcc
atcctcgcgctggcatccgtcaatctgtcgagccagaggttgatatcggccagcagagac
ggcgccgtcaaagtgtggaaatag
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