Lolium perenne (perennial ryegrass): 127305243
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Entry
127305243 CDS
T08650
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127305243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127305243
03009 Ribosome biogenesis [BR:
lper03009
]
127305243
04131 Membrane trafficking [BR:
lper04131
]
127305243
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127305243
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127305243
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127305243
Membrane trafficking [BR:
lper04131
]
SNARE
SNARE associated proteins
Others
127305243
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127305243
Exosome [BR:
lper04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127305243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_28
nSTAND3
Mg_chelatase
AAA_17
Viral_helicase1
AAA_18
IstB_IS21
ABC_tran
Parvo_NS1
Vps4_C
ATPase_2
AAA_lid_PRS2_C
AAA_7
NACHT
DUF815
TsaE
Zeta_toxin
NB-ARC
ResIII
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
127305243
NCBI-ProteinID:
XP_051191607
LinkDB
All DBs
Position
1:91321542..91325889
Genome browser
AA seq
816 aa
AA seq
DB search
MASNDEASASASAPAPTDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVVALHPDTME
KLQLFRGDTVLLKGKKRKDTICIVLADDTCEEAKVRMNKVVRKNLRVRLGDVVSVHQCQD
VKYGKRIHTLPIDDTVEGITGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIE
TDPAEYCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRRQMAQIRELVELPLRHPQ
LFKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK
AFEEAENNAPAIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGATN
RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHISKDTHGYVG
ADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETV
VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA
KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGG
SQGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP
DDASRLQIFKACLRKSPVAKDVDLNTLAKYTQGFSGADITEICQRACKYAIRENIEKDIE
MEKRRKDNPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGI
GSEFRFADRSSEAAAGTAADPFASAAAAADEDDLYS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacgacgaagcctcggcctcggcctcggcacccgctcccaccgatccgaag
ggcaagaaggacttctccacggcgatcctcgagaggaagaagtcgcccaaccggctcgtg
gtcgacgaggccaccaatgacgacaactccgtcgtcgcgctgcacccggacaccatggag
aagctgcagctcttccgcggggacaccgtcctactcaagggtaagaagaggaaagacact
atctgcattgtccttgcggatgacacctgtgaggaggctaaagtcaggatgaacaaggtc
gttaggaagaacctcagggtgcgacttggcgatgttgtctctgtccatcaatgccaggac
gtgaaatatggcaagcgtatccacactcttccaattgatgatacagttgaaggcattact
ggcaacctatttgatgccttcttgaaaccatacttcttggaagcataccgccctgtcaga
aaaggagatcttttccttgtcaggggtggaatgagaagtgtggagttcaaagtcatagag
actgatcctgctgaatattgcattgtcgcaccggatacagaaatattctgtgatggagag
cctattaagagggaggacgaggagaggcttgatgaggttggttatgacgatgttggtggg
gttcggaggcagatggctcaaatcagagagcttgttgaacttccactgcgtcatcctcag
cttttcaagtctattggcgtgaagccacctaagggtatactgctatttggaccgcctggt
tctgggaagaccctcattgcccgtgctgttgcaaatgagacaggtgcattcttctttctg
atcaatggtccagagattatgtcaaagctagctggagagagtgagagcaatctcaggaag
gcatttgaagaagcagagaataatgctcctgctataattttcattgatgagattgattct
attgctccaaagagagagaagacccatggagaagtggaacgccgtattgtttctcagctc
ttgactcttatggatggactcaaggctcgcgcacatgttattgttatgggtgctactaat
cgtcccaacagtatagaccctgctctccgtaggtttggaaggttcgaccgggaaatcgac
attggagttcctgatgaagttggtcggcttgaggttctccgcattcacacaaagaacatg
aaactagcagaggatgttgagttggaacacatttccaaagacacccatggatatgttggt
gcggaccttgctgcgctttgcactgaagctgctcttcagtgcattcgtgagaagatggat
atcatagatctggaggatgagaccatagatgctgagatattgaactcaatggctgttacg
aatgatcatttcaagactgctcttgggaccagcaacccatctgctcttcgtgaaactgtt
gttgaagttccaaatgtgtcatgggaagacattggtggactggaaaatgtcaagagggaa
ctgcaagagactgttcaatatccagtggagcatccagagaagtttgagaagttcggtatg
tccccatcgaaaggagttctgttctatggaccccctggttgtggtaaaaccttgttggcc
aaggcaattgccaacgagtgccaggctaacttcatcagtgtcaagggaccggagttgctt
acaatgtggtttggtgagagtgaagccaatgtccgtgaaatttttgacaaggcgcgccag
tctgcaccatgtgtcctcttttttgatgagcttgactcaattgccacacagagaggaggt
agccagggcgatgctggtggtgctgctgatagagtgctgaatcagcttctgacagagatg
gatggcatgaatgctaagaaaactgtcttcatcattggagccacaaacaggcctgacatc
atagactcagcgttgcttaggccaggacgtcttgatcagttgatatatattccacttcct
gatgatgcctcgaggcttcaaattttcaaagcttgtctaaggaagtcccctgtggcgaag
gatgtggacctgaatactctcgccaaatacacgcaagggttcagcggtgccgatatcacg
gaaatatgccagcgtgcgtgcaaatatgcaatcagagagaacattgagaaggacattgag
atggagaagcggaggaaggacaaccctgaagcgatggaggaggatggggtggacgaagta
tctgagatcaaggctgcccacttcgaggagtcaatgaagtatgcacggcggagtgttagc
gatgcggacatccgcaaataccaggcgtttgcccagacgctgcagcagtcccgtgggatt
ggcagcgagttccgctttgctgatcgatcatcagaagctgctgctggaactgcagctgat
ccctttgcgtctgctgccgcagccgctgatgaggatgatctatatagttag
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