Lolium perenne (perennial ryegrass): 127305603
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Entry
127305603 CDS
T08650
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127305603
Enzymes [BR:
lper01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127305603
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
127305603
NCBI-ProteinID:
XP_051192063
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Position
6:246399885..246401408
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AA seq
384 aa
AA seq
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MQYMSSMAPKGLCLLPLALLFLLFQTATANPRHENVIDRCWRGRGNWAANRQRLAVCSVG
FAGKMRQNRGAGVTPYTVTDPSDDPVRPRPGTLRYGATVLPGKVWITFQRDMHIRLAQPL
FVKSFTAIDGRGADVHIAGGAGIVLYEVNNVIVHGLQVHGIRAQPAGSVVRPGGAVQSVD
VGDGDAIRLVTSSKVWIDHNTLSRCEDGLLDVTLGSTDVTVSNNWFHDHDKVMLLGHDDG
QLTDRRMRVTVAFNRFGPNVNQRMPRIRHGYAHVVNNFYDGWRDYAIGGSMGPSVKSQGN
LFIASTTDSANVTRRMPAGDTAGKEWHWHSVGDSFENGAFFQQMGSRVRPNYNRHQAFPA
ASSSVVRSLTKDAGALRCSARSAC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatgtcgagcatggcgcccaaaggattatgcctcctacccctcgccctcctg
ttcctgctgtttcaaacggccaccgcgaacccccgccacgagaacgtcatcgaccggtgc
tggcgcgggcgcggcaactgggcggccaaccgccagcgtctcgccgtatgctccgtaggc
ttcgcggggaagatgcggcagaaccgtggcgccggagtgaccccgtacacggtcaccgac
ccgagcgacgaccctgtgcggccccggcccggcacgctgcggtacggcgcgacggtgctg
ccggggaaggtctggatcaccttccagcgggacatgcacatcaggctggcgcagccgctc
ttcgtcaagagcttcaccgccatcgacggccgcggcgcggacgtgcacatcgccgggggc
gccggcatcgtgctctacgaggtgaacaacgtgatcgtccacgggctccaggtgcacggc
atccgcgcgcagcccgcggggagcgtggtgcgcccgggcggcgccgtgcagagcgtggac
gtcggcgacggcgacgcgatccggctggtgaccagctccaaggtgtggatcgaccacaac
acgctgtcccggtgcgaggacggcctcctggacgtgacgctggggtccacggacgtgacc
gtctccaacaactggttccacgaccacgacaaggtgatgctgctggggcacgacgacggc
cagctcaccgaccgccggatgcgggtcaccgtcgcgttcaaccgcttcggccccaacgtc
aaccagcgcatgccgaggatcaggcacggctacgcacacgtcgtcaacaacttctacgac
gggtggagggactacgccatcggggggagcatggggccgagcgtcaagagccagggcaac
ctgttcatcgcctccacgacggacagcgccaacgtaacgcgaaggatgccggccggagat
accgccgggaaggagtggcattggcactccgtgggggactcgttcgagaacggcgccttc
ttccagcagatgggcagcagggtgcggccgaattacaacaggcatcaggcgttcccggca
gcgagctcgagcgtggtgcggtctctgaccaaggacgctggtgctctgaggtgctccgcc
aggtccgcctgctga
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