Lolium perenne (perennial ryegrass): 127305768
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Entry
127305768 CDS
T08650
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03030
DNA replication
lper03420
Nucleotide excision repair
lper03430
Mismatch repair
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127305768
03420 Nucleotide excision repair
127305768
03430 Mismatch repair
127305768
03440 Homologous recombination
127305768
03460 Fanconi anemia pathway
127305768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127305768
03032 DNA replication proteins [BR:
lper03032
]
127305768
03400 DNA repair and recombination proteins [BR:
lper03400
]
127305768
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127305768
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127305768
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127305768
MMR (mismatch excision repair)
127305768
DSBR (double strand breaks repair)
HR (homologous recombination)
127305768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
OB_MEIOB_N
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
127305768
NCBI-ProteinID:
XP_051192255
LinkDB
All DBs
Position
6:complement(236666781..236670265)
Genome browser
AA seq
653 aa
AA seq
DB search
MAAVRLTPNGVPAGLDGDLNLRPILQVVNLRCVNVDGGPGAARADRWRGLVSDGNETCPA
MFAAQLSGLTRSGVIRRGTVVQLDEYVVNVVGGRRVFVVLNMTVLVAECDIIGNPVITET
EFSTQTPQRVEQSNGTRQYGSMAGNPSPIRSNGNVPVFQPSMSENSLNTPTRVGNKPPAF
QPTAQPSYRPAPSYKNHGAIAKNEAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNA
KGEGKVFSFDLLDSDGGEIRVACFNALLDRFYEVVEVGKVYVVSRGNLKPAQKNFNHLNS
EWEIMLENGSTVELCPDEDRSIPSQRFDFRPISEIEDTPTTNMVDIIGVVTSVSTCTTLQ
KKNGTETQKRNINLKDMSGRSVDVTMWGDFCNREGSKLQEMVERGVFPVLAVKTGRVTDF
NGKSVGTISSSQLLIDPDISEAHTLRQWFDAGGRDASTQSISRDVAPAASRNVVRMTVAQ
IKDEGLGMQDKPDWVTVKASIIFFKSDSFCYTACPTKEGDRQCNKKVTKGTSGLWCCDRC
DKEFPECDYRYLLQLQIQDHSGTAWVTAFQEAAQELLGCSAGDLNRYKEEEDPRFAETMV
SCLFQDYLLRLKVKEETYGDERRVKNTLVKVERFDPAGESKYLLDSISRSVGY
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgaggctgaccccgaacggcgtgccggcggggctggacggggacctgaac
ctccgcccgatcctgcaggtcgtcaacctgcgctgcgtcaacgtcgacggcggccccggc
gctgcccgggccgacaggtggcgcggcctcgtctccgacggcaacgagacctgccccgcc
atgttcgccgcgcagctcagcggcctcacgcgctccggcgtcatccgccgcggcaccgtc
gtgcagctcgacgagtacgtcgtcaacgtcgtcgggggcagaagggtcttcgtcgttctg
aatatgacagttcttgtcgcggagtgcgacatcattgggaatccagtgattacagaaact
gaattttctacgcaaaccccccaaagagtggagcaatctaatggaacacgtcaatatggt
tccatggcaggaaacccgagtccaataaggtccaatggcaatgttccagtcttccaacct
tcaatgtcagagaactctttgaacacacccaccagggtcggcaacaaacctccggccttc
caaccaactgcgcagccatcctatcgtcctgcacccagttacaaaaatcacggagcaatt
gcaaaaaatgaagcccctgctagaataatccccatatcctcattaaatccttatcaggga
cgctgggctatcaagggtagggttactgctaagggagacatccgccggtaccataatgca
aaaggtgaaggaaaagtattcagcttcgacctgcttgattctgatggtggtgagatacgg
gtggcgtgtttcaacgctcttcttgatcgcttctatgaagttgtggaagttggtaaggtc
tatgtggtatcaagagggaacttgaaacctgcacagaagaactttaaccatctgaacagt
gagtgggagattatgttggagaatggatcaacagttgagctttgtcctgatgaggatagg
tcaattccctctcagcgatttgactttagaccgatcagtgaaattgaagatactccaacc
actaatatggttgatatcataggtgttgttacgtctgtcagcacttgcaccacattacag
aagaaaaatggcacggaaactcagaaaagaaatataaacctgaaggatatgtctggtcga
agtgttgatgtaaccatgtggggtgacttttgcaacagagaaggctcaaagctgcaagaa
atggttgaacgtggggtcttccctgtgctggctgtcaaaacaggaagagtgactgatttc
aatggcaagtctgtcggcacaatttcttcctctcaactcctcatagaccctgatatctct
gaagctcatactctgaggcagtggtttgacgctggaggaagggatgcttctactcagtcc
atatccagggatgtcgctcctgcagcatcaaggaatgtagtccggatgacagtagctcaa
atcaaggatgaaggtcttggaatgcaggacaagcctgattgggtcacagtgaaggcctcc
attatattcttcaagagcgacagcttctgctacacagcttgccctaccaaggaaggtgac
aggcaatgcaacaagaaagtgacaaaggggacctctggcttgtggtgctgtgacagatgc
gacaaggagtttccagagtgcgactacaggtatcttctgcagctacagattcaagatcac
tcgggaacagcttgggtgacggcttttcaagaggctgcgcaggagttactaggttgctcg
gcgggagatctcaataggtacaaagaggaggaggatcctcgcttcgcagagaccatggtc
agctgtctgttccaggattatctgctcaggctgaaagtcaaagaagaaacatatggtgac
gagcggagagtgaagaacaccctggtcaaagtggagaggtttgatcctgcaggtgaaagt
aaatatctgctggattcgatttcaaggtcagtgggttattaa
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