Lolium perenne (perennial ryegrass): 127306012
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Entry
127306012 CDS
T08650
Name
(RefSeq) uncharacterized protein isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127306012
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127306012
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
TPR_19
HAT_PRP39_N
Suf
Motif
Other DBs
NCBI-GeneID:
127306012
NCBI-ProteinID:
XP_051192576
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Position
6:233952164..233962924
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AA seq
1155 aa
AA seq
DB search
MELSPEHSPPTTTTTAGFSAGGGSEPSPPTNFSSLFPLFPLAAPAEVSQFLPNPSFSFDA
SSLNIPPAASSSLPPPLSASSDEEEAAPKPAPAKYDLVPSSSSDDERGSRRKDRKRRKRR
RDQERYDGAAASRKPGVRAWAGSETKLVKDYYFDAKGDQDNLAFGSIYRMDIARYKPQST
LDARGLNRRFYNHGHASSHMDLDSDLDGLDSKVKVGGRYFSAKHAVLERNKGFKHLKVLK
RDNAILPEDFIPVEASSVPAESTTAQHELEESWEDEILRRTKEFNKMTRESPHDEKIWLA
FAQFQDKVASSQPQKAARLQTTERKISILEKALELNPDNEELLLCLLKSFGERDSTESLF
GKWEKILMEHPDSCKLWKQYLILCQGEFSRFKVSDTRKSYTYAVEAISAACTKLCRQDSQ
NADLKAQPSLVQLELGLVDIFVNLCRFEWQTGHRELATGLFQAQLEFSLFSPPLSLSTSS
KQRLFEHFWNSGGARIGEDGALGWSMWLAKDEESRQNMVMQDNPQESEGGGWSGWFDLSR
ANAETDDVSNKAIELSAADGIDPEDPDVEDASAQDDVESLLKKLGIDVDAEFSSEVKDAK
TWNRWSAMELSRDNEQWMPVHEKSGVGSSRSDDASPGEVNEQLSRVILFEDVTEFLFSLS
SEEARFSLICQFIDFYGGKISRWTSSNSSSWLDRIMSLEMISNDILEDISTVSELVNKTQ
NSSHYRLEFLLGSMHDLSQRPGLVKFLQNAILLSLDVFPRNHILEEAVLVTTEMYTTQKD
TLSAPAKPSRALAKSLLKKDRQDLLLCGIYGRIEARHGNIDQARKIFDMALLSTEGGTQD
LVRKVPILYFWYAEMEISISASRNDSDSVHRAIYILSCLGSNIKYTSFGGPISRPLVLRA
RQGFKEQIKSLRPAFACGSLKEESVALICSASLFESMTSGYSSGLEVIEEAFPFSESNHT
LEYEELWMYYINLLHKNLTKLRLSRVWPNILKGVQTYPYNPKSYASMLTLGCLYSVPNNL
RLTLDKCSQRDPSIISLLFALSFELSKAESYNRIHGLFERALADDKLQKSVVLWRCYLAY
EAEIACNASAARRVFFRAIHACPWSKRLWLDGFQKLSSVLTMKELSDLQEVMNGKELFVR
TDIYEILLQDEAEDD
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggagctctcgccggagcattcgccgccgacgaccactaccaccgccggcttctcagct
ggaggaggatccgagccaagccctcccaccaacttctcctctctcttccccctcttcccg
ctcgccgcccccgccgaggtttcccagtttctcccgaaccctagcttctctttcgacgcc
tcctccctcaacatcccacccgctgcctcctcgtccctcccgccgccgctgagcgcttct
tcggacgaggaggaggcggcgccgaagcccgcgcccgcgaagtacgacctggtgccctcc
tcgtcgtccgacgacgagagggggtcgaggcggaaggacaggaagaggaggaagcggaga
agggaccaggagcgctatgacggggcggctgcttcgcggaagccgggcgttcgcgcctgg
gctgggtcggagacgaagctggtcaaggattactacttcgacgccaagggcgaccaggat
aacttggcgtttggatccatctacagaatggatattgcacgctacaagcctcaaagcaca
ctggatgcacgtggtctgaaccgacgtttctataatcatggacatgcttcatcacatatg
gatctagattcagatttggatggactggatagcaaagtaaaagttggaggtcgttacttc
tcagcaaaacatgctgttttagaaagaaacaagggtttcaaacacctgaaagtgttgaaa
agagataatgcaattctccctgaagattttatccctgtagaggcatcatccgttcctgca
gaaagcacaaccgcgcaacatgaacttgaggaatcttgggaagatgaaatacttcggagg
acaaaagagttcaataagatgacacgagaatctccccatgatgaaaaaatttggttggcc
tttgctcagtttcaggacaaagtcgccagtagtcagccacaaaaagctgcacgtttgcaa
acaactgaaagaaagattagtatattggagaaggctttggagctcaatccagataacgag
gaattgttgctttgccttttgaagtcatttggtgagagagatagcactgagagtctcttt
ggtaaatgggagaaaatacttatggaacaccctgacagttgtaagttgtggaaacaatat
ctaattctttgccaaggggagttctccagattcaaagtatctgatacgcggaagtcttac
acatatgcagtagaggcgatatctgcagcttgcaccaagctatgtaggcaggacagtcaa
aatgctgatctgaaggcacaaccttcattagttcagcttgaacttggtttagtggatata
tttgtgaatctatgccggttcgaatggcagacaggacatcgagaattagcaaccgggcta
tttcaagctcaacttgagtttagcttattctctcctcccctctccctgtccacaagcagt
aagcaaaggctctttgagcacttctggaatagtggtggtgccagaattggagaggatggg
gctcttggatggtctatgtggttagcaaaggatgaggagagtcgacaaaacatggttatg
caagacaatccccaagagtctgaaggtggaggctggagtggttggtttgatctctctaga
gcaaatgccgaaacggatgatgtttctaacaaagcaatagaactatcagccgctgatgga
attgatccagaagaccctgatgttgaggacgcatctgcgcaagatgatgttgaatctttg
ctaaaaaagctcggcattgatgtagatgccgagttcagtagtgaagttaaagatgcaaaa
acatggaatagatggtctgcaatggagctgtcgagggacaatgaacaatggatgcctgtt
catgaaaagtctggagtaggatcaagtcgttctgatgatgcttcacctggagaagtcaat
gagcagctttccagagtaatcttgtttgaggatgtaactgagtttctattctctttatct
tcagaagaggctcgtttttctttgatctgccaattcattgatttctacggtggtaaaatt
tcaagatggacgtccagcaacagttccagttggcttgatagaattatgagccttgagatg
atatcaaatgatattttggaagatattagcactgtatctgaacttgttaacaagactcaa
aattcaagtcattatagattggagtttttattagggagtatgcacgatctttctcaaaga
cctggcctggtgaaatttctgcaaaatgcaatattgctttcccttgatgttttccctcgt
aatcatattttggaggaagctgtccttgttaccaccgaaatgtataccacacaaaaggac
actttgtctgcacctgctaaaccatcacgggctttggccaaaagcttgctgaagaaggac
agacaggatcttttgctttgtggaatatatggtcgtattgaggctaggcatgggaacatt
gaccaggcaagaaagatatttgacatggcactgttatctaccgaaggaggtacacaggat
ctcgtcaggaaagttccaattctttatttttggtacgctgagatggagatttcaatatct
gcttcaagaaacgattctgattctgtgcatcgtgcaatttacattctttcctgcttgggg
agcaacatcaagtatacctcttttggtggtcctatatcacgcccgcttgtattgagggct
cgtcaaggctttaaagagcagattaaaagcttgcgacctgcatttgcatgtggttctttg
aaagaagaatcagttgctttgatttgctcggcatccctgttcgagagtatgacttctggt
tattcttctggtcttgaagtgatagaggaggcctttccattttcagagagtaaccatacg
ttggaatatgaagagttgtggatgtattacatcaatctgcttcacaaaaatctgaccaag
ttgcgtctctcaagggtttggccgaacatattgaaaggagtacaaacatatccgtacaat
ccaaaatcatatgcatccatgttaactctgggctgtctttacagtgttcccaataatctg
cgtctcacacttgacaaatgtagtcaaagggatccttccataatttccttgctgttcgct
ttgtcctttgaattgagtaaagcagaatcatacaatagaatacatggtctgtttgagaga
gctctagctgatgataagttacagaagtctgttgtattgtggcgctgttatctagcttat
gaggcggagatagcctgtaatgcttctgcggcacggcgtgtgttcttcagagctatacat
gcttgcccatggtctaaacgattatggttggatgggttccaaaaattgagctcagttctg
actatgaaagagttatcagatctccaggaagtgatgaatggaaaggaattgtttgttcgc
actgacatttatgagatactgttacaagacgaagctgaagatgactag
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