Lolium perenne (perennial ryegrass): 127306168
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Entry
127306168 CDS
T08650
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127306168
04121 Ubiquitin system [BR:
lper04121
]
127306168
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
127306168
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
127306168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
127306168
NCBI-ProteinID:
XP_051192742
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All DBs
Position
6:complement(222001049..222004813)
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AA seq
1142 aa
AA seq
DB search
MQPSADRRRGNPSTAASRGVWRPRSAAAPTPTAADPHPPIPTNAAPHHHDNAAPILPLPN
PASDARPHHRRQRRPNPTNRHAPPQERAPTNHSNSNISSHRPAPPPDRAPANHSNSRSHR
RPPPQERTPLAPATAAAPAPAGAAVPQLVQEIQDKLARGAVECMICYDMVRRSAPVWSCG
SCFSIFHLPCIRKWARSPASVSDASDPAASWRCPGCQSVHDVPARDIAYTCFCRRRRDPP
NDLFLTPHSCGEPCSKPLGRTDPAAKGVSPDDDAAPRCPHLCVLQCHPGPCPPCKAFAPE
RPCPCGKQSIVRRCADRSTPVTCGQQCEQLLPCRRHRCGKVCHTGPCGDCQVNFSAQCFC
GKKTETMLCGEMVVKGSLSEKDGVFSCSEACGHSLACGNHVCQDVCHPGPCGECELVPGK
VTTCHCGKTKLQEKRASCLDPIPTCDKVCDKKLSCGLHRCKVTCHEGKCPPCLVRVEQRC
RCGSSVQMVECYMVLMEEFRCNKPCGRKKNCGRHRCSECCCPLSKPFAQHEGGGNMDPHF
CQIPCGKKLRCGQHGCQHLCHSGHCEPCRETIFSELSCACGRTSIPPPQPCGTPTPSCPH
QCMVPRPCGHPASHQCHFGDCPPCVVPVMRECTGGHVMLRNIPCGSKDIRCNQPCGKNRQ
CGLHACARTCHPPPCDAPTANGDASSSSGSKVSCGQLCGVPRRECKHTCNTPCHPSSPCP
DVRCEVRVTITCSCGRITSTVPCSAGGSYNGDSMFDISIIQQLPMPLQHVESNGKRIPLG
QRKLCCDEECAKMERKKVLAEAFDITPPNLDALHFGENSNASELLSDLFRREPKWVLAIE
ERCKFLVLGKARGNSSSNIKVHVFCHMTKDKRDAIRLIADRWKLSVQEVGWEPKRFVTIH
VTPKSKAPARVLGSKAGIHVSASHPYFDPMVDMDPRLVVAMLDLPREADVSSLVLRFGGE
CELVWLNDKNALAVFSDPARAATALRRLDHGSAYQGAAMFCPSSTTQASSSGNVWVGAQR
DGVSAAKTSANPWKKAGTSESDPSVGHSPGTSLLGQAPGSGWRCADTPGQAMGTNRWNAL
ESAAATSSGATDKRKMPPRTDAGSSSASAPRPDIGSSAAPNARQAVPKLQPDFEVEDWEE
SC
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcagccctccgccgatcgacgccgcggcaacccatccacggccgcctcccgtggtgta
tggcggccccgatccgccgctgcgcctacccccaccgccgctgacccccatcctccgatc
cccaccaacgccgccccccaccaccatgacaacgccgcccccatcctacccctcccgaat
ccggcctccgacgcccgccctcaccaccgccgccaacgccgcccgaaccccaccaaccgc
cacgccccgccgcaggagagggctccgaccaaccacagcaacagcaacatcagcagtcac
cgccccgccccgccgccggacagggctccggccaaccacagcaacagcaggagccaccgc
cgacccccgccgcaggagaggactccgctcgcgcccgcgaccgcggccgctcctgcgccg
gcaggagcggcggtgccgcagctggtgcaggagatccaggacaagctggcgcggggcgcg
gtggagtgcatgatctgctacgacatggtgcggaggtcggcgcccgtgtggtcctgcggc
agctgcttctccatcttccacctcccctgcatccgcaagtgggcgcgctccccggcctcc
gtctccgacgcctccgacccggccgcctcctggcgctgcccaggctgccagtccgtgcac
gacgtcccggcccgcgacatcgcctacacctgcttctgccgccggcgccgcgaccccccc
aacgacctcttcctcaccccgcactcgtgcggcgagccttgctccaagcccctcgggagg
accgatcctgctgccaagggcgtctcccccgatgacgatgctgcccccaggtgcccgcac
ctctgcgtcctgcagtgccaccctgggccgtgcccaccctgcaaggcgtttgctccggag
cggccgtgcccttgcggcaagcagtctatcgtgcggcggtgcgcggaccggagtacgcct
gttacatgtgggcagcaatgcgaacagctcctcccctgccggaggcaccgctgcgggaag
gtatgccacaccgggccttgcggggactgtcaggtcaacttctctgcgcagtgcttctgt
ggcaagaaaacagagacgatgttgtgcggtgagatggtggtgaaggggagtctttcggag
aaggatggggtgttctcgtgcagcgaggcttgtggccacagtctggcatgcggcaatcat
gtctgccaggatgtttgccacccagggccgtgcggggagtgcgagcttgtgccagggaag
gtcaccacatgtcattgcggcaagacaaagctgcaggagaagagggcgagttgtttggac
ccaatccccacctgtgacaaggtctgtgacaagaaattgtcgtgcgggcttcataggtgc
aaggttacatgtcacgagggaaagtgtccaccatgcttggtgcgcgttgagcagaggtgc
cgctgtggctcatcagttcagatggttgagtgctacatggtcttgatggaagagttccgc
tgcaacaagccttgtggccggaagaagaactgcgggaggcacaggtgcagtgagtgttgt
tgcccgctgtcgaagccgtttgctcagcatgaaggtggtggcaacatggatccccatttc
tgccagataccatgtggtaagaagctccgttgtgggcagcatggatgccagcatctctgc
cacagcggtcactgcgaaccttgccgtgagaccatattcagtgagctctcttgtgcctgt
ggcaggacatctattccgccaccacagccgtgcggcacaccaactccatcgtgcccacac
cagtgcatggtccctcggccttgtgggcatccagcttcgcatcaatgccattttggggac
tgcccaccttgcgttgtgccagtgatgagggaatgcactgggggacatgtgatgttaagg
aacatcccttgtggttcaaaggatattagatgcaaccagccctgtggaaagaaccgtcaa
tgtggactgcatgcttgtgccaggacttgccatcctcccccttgtgatgcgccgaccgca
aatggagatgcgagttcaagctctgggagcaaagtttcatgtggacagttatgtggtgtc
ccaaggagggaatgcaagcacacttgcaataccccatgccacccatcatcaccttgccca
gacgtgagatgtgaagtccgtgtgactattacctgttcttgtggccgtatcacttcaact
gtgccctgcagtgctggtggatcctacaatggcgatagtatgtttgatatctccatcata
cagcagctgccaatgcctctccaacacgtggaatcaaatgggaagcggatacctcttggg
cagaggaaactttgctgtgatgaggagtgtgcaaaaatggagaggaaaaaggtccttgct
gaagcttttgacataacaccgcccaatctggatgcattacattttggtgagaactcaaat
gcatcggagttgctctctgatcttttccggcgcgagccaaagtgggtgctagccatagag
gagaggtgcaaatttcttgtgcttgggaaggcaagaggaaattcttcaagcaacatcaag
gtccatgtcttctgtcacatgacgaaggataagagggatgctatcaggctcattgcagat
aggtggaagctgtctgttcaggaggttggttgggagcccaagcgttttgttaccattcat
gtcacacccaagtcaaaggcacctgctcgcgttctgggttccaaggctggtatccatgtc
tctgcttcccatccttactttgatcccatggtggacatggacccgaggcttgttgttgca
atgctggacctgccaagggaagctgatgttagctctctagtcttgaggtttggtggggag
tgtgaattggtttggctgaatgacaagaatgccttggcggtcttcagtgatccagctaga
gccgcgacagcgctgaggcggctggaccatgggtctgcttaccagggtgctgcaatgttt
tgtccaagcagcaccactcaggcttcgtcatcaggcaatgtgtgggttggagcacagagg
gacggagtatcggctgcaaagaccagcgccaatccatggaagaaggctggtacctctgaa
tctgacccatctgttggtcattctccagggacaagtctgcttggccaagctccagggtca
gggtggaggtgtgctgacactcctggtcaggccatgggtacaaacagatggaatgctctg
gagtctgctgctgcgacaagctccggggcaaccgacaaacgcaagatgcctcctcgcact
gatgctgggtcctccagcgcttctgctcctcgcccagacattgggtccagtgcagcccca
aacgctaggcaagcagtgcccaagctgcagccagactttgaagtggaagactgggaagaa
tcgtgctga
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