Lolium perenne (perennial ryegrass): 127306179
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Entry
127306179 CDS
T08650
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127306179
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127306179
Spliceosome [BR:
lper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127306179
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
Motif
Other DBs
NCBI-GeneID:
127306179
NCBI-ProteinID:
XP_051192754
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All DBs
Position
6:212831136..212842845
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AA seq
1176 aa
AA seq
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MHCLSPHFLLLLPLPTASRHALPQTPPPPSLLPPSRPAQPRPAPLHLRSARSPSRAAAPV
SDDDEDEEEADEEDDDELEIHDVDAEYDEDEDGEGDERDEELEEESGGEYDEEGDAAGDS
REETAARRQRSEDYKSQQVAKLVAEVREFGEDMIDYNELAGIYDFPIDKFQRLAIQAFLR
GSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGL
LTGDSAINKDAQILIMTTEILRNMLYQSVGMSASEGRLFEVDVIVLDEVHYLSDISRGTV
WEETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSNKRPVPLTWHFSKKFAL
LPLLDEKGKKMNRKLRMSHVQNISSPKSDYYYVKGKRKVRTNKNEQGSRSPLDISKQVQL
SKHEVTNMRRSQVPLIRDTLSQLWESDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEAS
EVELELRRFRMQYPDAIRENAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE
TLAAGINMPARTAVISSLSKRIDAGRQLLTPNNLFQMAGRAGRRGIDTVGHSVLVQSTYE
GPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNNKGLGDVKAKRSGRTLEEARK
LVEQSFGNYVGSNVMVAAKEELERIQKEIQYLSSEVTDEFIDRKCREELSEEHYTEISFL
QNKLKEEKKIRNELKKRMEVERMAAWKTRLEEFESGYLPFICLQYKDKDSVHHTIPAVFI
GSLSSFDDQKIVSMLEDDSTGPDKREVDSEEQLHYPSYYVALSSDNAWYLFTEKWIKAVY
QTGLPAVPSVEGGPLPRETLKQLLLREDMIWDKIAKSEHGSLLCMDGSLDTWSWSLNVPV
LNSLSEDDEVERFSQEHQTAVESHKKQRRKVSQLKKTIRSTKGFREFQKIIDMRNFTKEK
IERLEARSRRLTRRIMQIEPTGWKEFLQISKVIQEARVLDINTQVIYPLGETAAAIRGEN
ELWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVIGVINYLEE
QRNSLLDLQEKHGVKIPCDIDTQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRTMD
LLAQIPKLPDIDPVLQKNAQIACSVMDRVPLSELAG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcctctccccgcacttcctcctcctcctccctctccccaccgcctcccgccac
gcgctcccccagaccccgccgccgccctctctcctcccgccgtcgcgcccagcccagccc
cgccccgctccgctccacctccgctccgcgcgctccccgtcccgcgccgccgcgccggtg
tcagacgacgacgaggacgaggaggaggccgacgaggaggacgacgacgagttggaaata
cacgacgtagacgcggagtacgacgaggacgaggatggagaaggagatgagcgcgacgag
gagctggaagaggagagcggcggcgagtacgacgaggagggggacgcggccggggattcc
cgagaggagaccgcggcgcggaggcagcgctccgaggattacaagtcgcagcaggtggcc
aagctcgtcgccgaggtgcgggagttcggtgaggatatgatcgactacaacgagctcgcc
gggatctacgacttccctatcgacaagtttcagcgcctggctatacaagcatttctaaga
ggctcgtccgtcgtagtttctgcacctacaagtagcggaaagacactaattgcagaagct
gcagctgttgcaacagtggccagaggaaggcgtctcttctacacaacaccgttgaaggcc
ttgtcaaatcagaagttccgcgatttccggaatacctttggtgatcataatgttggtctt
cttacaggagattctgctatcaataaagatgctcagatcctaataatgacgacagagatt
ctgcgtaatatgctgtaccaaagtgttggtatgtcagcatccgaaggtagattatttgaa
gttgatgtcattgttttggatgaagtccattacttaagtgatatctcacgcggtactgtt
tgggaagaaacggtgatatattgtccaaaggaagtccagcttatatgcttgtctgccacc
gtcgcaaatcctgatgaattagctggctggataggtcagatccatggaaaaacagagctg
gtgacatcgaacaaacgtcctgttccactaacttggcacttctcgaagaaatttgcactt
ctaccccttctcgatgaaaagggaaagaaaatgaataggaaattgcgaatgtctcatgtc
cagaacatatcttctcccaaaagtgattattactacgtgaaaggaaagaggaaagttaga
acaaataaaaatgagcaaggtagcagaagcccgttggacatatcaaaacaagttcaattg
tccaagcacgaggtcaccaatatgcggcgttcccaggttccactaatacgtgacactttg
tcacagctttgggaaagcgacatgcttccagcaatctggtttatctttagtagaagagga
tgtgacgcagccgttgaatatctcgaggattgtagacttttgcatgattgtgaggctagt
gaagttgaactggaacttaggaggttcaggatgcaatatcctgatgctatccgggaaaat
gccgtgaaaggactcttgcgaggtgttgctgcccatcatgctggttgcttgccactgtgg
aagtcctttattgaagagctatttcagcgtggccttgttaaagtagtctttgcgacagaa
acccttgctgctgggatcaatatgcctgctagaacagccgtgatatcttctctcagcaaa
agaattgatgccgggcgccagctcttaaccccaaataacttattccagatggcaggtcgt
gctggaaggagagggatcgacacagttgggcattctgttcttgttcagtctacttatgaa
gggcctgaagaatgttgtgacgttatctttgctggacttgagccacttgtttcacagttt
accgcatcatacgggatggttttgaatctccttgcgggctcgaaagttactcataacaat
aaaggattgggtgatgtcaaggctaaacgttctggaagaacattagaagaagctcggaag
ttagtggagcaaagctttgggaattatgtagggagcaatgtgatggttgctgctaaagaa
gagctcgagagaatacagaaagaaatacaatatctctcttctgaagttacggatgaattc
attgaccggaaatgcagggaggaattatcagaggaacactatacggagatctctttttta
caaaataaattaaaggaagagaagaagataagaaatgaactgaaaaagaggatggaagta
gagagaatggctgcatggaaaactcggctagaagagtttgaaagtggctaccttcctttc
atttgcttgcagtataaagataaagattcagttcaccacacaattcctgctgtttttatt
ggaagcctcagctcctttgatgatcaaaagatcgtgagcatgctagaagatgattctact
ggcccagacaagcgggaagttgatagtgaggaacagcttcattacccatcctactatgtt
gctttgagttcggataatgcatggtatctgttcacagaaaaatggataaaagctgtttac
cagacaggtttacccgctgttccttcagtggagggtgggccactccccagagaaaccctg
aagcagctccttttgcgtgaagatatgatttgggataaaattgcaaaatctgaacatggt
tctttgttatgcatggatggatccctagacacatggtcatggagtcttaatgttcctgtg
cttaatagcctctcagaagatgatgaggtagaacgattctcccaggaacatcaaaccgct
gtagaatctcacaagaaacagaggaggaaggtttcacaattgaagaaaacaatcaggagt
actaagggttttagagaatttcaaaagatcattgacatgagaaactttacaaaagaaaag
attgagcgtttggaagccagatcccgtcgtttaactagacgcataatgcaaattgaacca
actggttggaaagaatttttgcagattagtaaagtcatacaagaagcaagagtgttagat
atcaatacccaggtaatctatcctttgggtgagacggcagcagccatacgaggggaaaac
gaactctggcttgctatggttcttaggaacaaggtccttttggatctgaagccttctcaa
ctggcagcagtttgtggaagcttagtgtcagaagggatcaagcttcgtccatggaaaaat
agcagttatgtgtatgaaccatcttcagttgttatcggagttataaattacttagaagag
cagagaaattcactcctcgatctccaagagaaacatggtgtaaagataccctgtgacata
gatacccagtttgctggaatggttgaagcctgggcatcagggttgacttggagggagatt
atgatggactctgcaatggatgatggagatttagcccgtttgctcagacgaacaatggat
ttactagctcagattccaaaattgccagacatagatccagttctccaaaaaaatgcacag
attgcttgcagcgtcatggatcgagtaccactaagtgagcttgctggctga
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