Lolium perenne (perennial ryegrass): 127306239
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Entry
127306239 CDS
T08650
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127306239
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
127306239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
127306239
NCBI-ProteinID:
XP_051192824
LinkDB
All DBs
Position
6:58272463..58288816
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AA seq
1613 aa
AA seq
DB search
MDGGHGQRQPLSPAISASAVVPHQRQMQLHQHPARPAIADLFTLYLGMNSKQRAEDPAKE
TSNKLQKRVSALNRDLPPRDEQFISDFEQLRTRFPDQEQLQAVTESVLISFVLQCSSHAP
RSEFLLFATRCLCARGHLRWDSLIPSLLSAVSSAEAPTGQAGSVTVGGPVSSSSAIVAPS
APSFHASNPTSPLSAMNAIGSPTQSGIDQPVGANVSPMKATEFASLGQLGTTSRGDQSGR
GAETSYLYHLSCRIILAGLQSSLKPATHAVTFQHMVNWLVNWDQRPRGVDEANPAQTRIE
RPVHEWMHLCLDVIWILVDEEKCRVPFYELVRSNLQFLENIPDDDALICIIMEIHRRRDM
VCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLAN
SIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQTSTPGAVFSPDMIGEA
VADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVANGDQQILR
SNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFIS
SSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQTTKASGERMIDFMNLDERAMGMFWV
LSFTMAQPACDAVMNWFTSAGGAEFIQGPNMQPNERMTMMRETYPLSMTLLSGLSINLCL
KLAFQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLL
LLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLRDF
FLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSE
KTLRYFPPLIRDFLMGRMDKRGQTIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLNHSF
AQHRHYLCAGAWMLMNGHLEINSTNLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRG
HPAQDLLSKAITNLAFFIWTHELLPLDILLLALIDRDDDPYALRLVISLLERPELQHRIK
AFCSSRSPEHWLKNQHPKRAELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIE
NDATDIADRVLAFYSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLGVSTKTPFS
DSFAQTLGSSNSSICPPPEYFANLLLGLVNNVIPPLSSKSKSNPADASGNTARTSFSKPH
ASAQAGGSSNADGQRAFYQNQDPGSYTQLVLETAAIEILSLSVPASQIVSSLVQLIAHVQ
GTLIQSNSGQGMSGGLGQNSGLPTSPSGGGAESAAANRANTSASGISANFVSRSGYSCQQ
LSVLMIQACGFLLAQLPPEFHMQLYSEAARIIKDCRWLADSSRPVKELDSAVGYALLDPT
WASQDNTSTAIGNIVALLHSFFSNLPQEWLESSHTVIKHLRPVNSVAMLRIAFRILGPLL
PRLAFARPLFMKTLALLFNVLGDVFGKNSQSSPHVEASEISDIIDFLHHAVMYEGQGGPV
QSTSKPKVEILTLCGKVVDMLRPDVQHLLSHLKTDPNSSIYAATHPKLVQHPS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggacgggggccacgggcagaggcagccgctgtctccggcgatttcggcctccgcggtg
gtaccccaccagcggcagatgcagctccaccagcacccggcgcggccggccatcgccgat
ctcttcaccctatatctcggtatgaactccaagcagcgggccgaggacccggccaaggag
acctcgaacaagctgcagaagagagtatctgctcttaacagagatctgcctccccgggac
gagcagtttatttcggattttgagcagttgcgcacacggtttccagaccaggagcagtta
caggcagtcacggaatcagttctcatctcatttgttctgcaatgcagtagccacgctcca
cgatctgagttcctgctctttgctacgcggtgtctgtgtgctcggggccaccttagatgg
gacagcctcattccatctctactcagtgcagtttcttctgctgaggcaccaacgggacaa
gcgggttctgtgactgttggtggccctgtatcttcttcctcagctattgtagcaccaagt
gctccaagctttcacgcgtcaaatcctacatctcctttatcagcaatgaacgctatagga
tctcctactcaatctggtattgaccaacctgtaggtgcaaatgtgtcacccatgaaggct
actgaatttgctagtcttgggcagcttggtaccacatcaagaggtgaccagtctggcagg
ggagcagaaactagttatctgtaccatttatcctgtaggatcattttagccgggctacag
tccagtttgaagccagctacccatgccgtgacattccagcatatggtaaattggttggtt
aactgggaccagagaccccgtggcgtggatgaagccaatccagcgcaaactaggattgaa
aggcccgtgcatgaatggatgcatctatgcttagatgtgatctggattttggttgatgaa
gagaaatgtcgtgttccattctatgagcttgttcgcagcaacttgcagtttctcgagaac
attcctgatgatgatgctctaatttgcatcattatggagatccataggaggagggatatg
gtgtgtatgcacatgcagatgttggatcagcaccttcattgcccaacatttggaacccat
cggttcttgtcacaatcctacccaagcatagctggtgaatctgtagccaatttgcgttat
tctcccattacttatcctagtgttctgggagagccactgcatggagaggatcttgcaaac
tctattcctaaggggggtttagattgggaacgtgctctgcgttgcttgaggcacgctctc
cgcacaactccatcaccagattggtggagacgtgttcttcttgttgctccttgttacaga
tcacattctcaaacatcaacaccaggagctgttttctcaccggatatgattggtgaggca
gttgctgacaggacgattgaactactgaagttaactaactcagagactcagtgctggcaa
gattggcttttgttcgcagacatctttttcttcctaatgaaaagtggctgtattgatttt
cttgattttgtggacaagcttgcgtctcgagtagcaaatggtgatcaacagattttacgc
agtaatcatgtcacctggttgcttgcacagattatccgtattgagattgtgatgaacaca
cttagttcagacccaaggaaggttgaaacaacacgcaagataatttcgttccataaagaa
gacaagagcctcgatcctaataatatcagccctcaaagtattcttcttgatttcataagt
agcagccaaactttgcgcatttggtctttcaacacttcaattagagagcatttgaacagt
gatcagcttcaaaaaggcaaacagatagatgagtggtggaaacagacgacgaaagcttcg
ggagagagaatgatagattttatgaacttggatgaacgggccatgggcatgttttgggtt
ctctccttcaccatggcacaaccagcatgcgatgcagtcatgaactggttcacatcagct
ggtggggcagaattcattcagggacccaatatgcaaccaaatgaaagaatgacgatgatg
cgtgaaacttaccccttgtcaatgaccctgctttctgggttgtctatcaacctttgtttg
aagcttgctttccagcttgaagagactatatttcttggccaggctgttcctagcattgct
atggtggaaacctatgtgaggttgctgcttataacaccccattcattgtttcgtccgcat
tttacaacattaacccaaagatctccatctattctgagcaaatctggtgtgtctttgctc
ctgcttgagatactgaattacagactacttcctctgtacaggtatcacggaaaaagcaaa
gcattgatgtatgatgtcacaaagataatatcaatgattaagggaaaacgtggagaacat
cgcctttttagattagctgaaaatttgtgcatgaacttaattctctcactgagagacttc
tttttggtgaaaaaagagttaaagggaccaaccgagtttactgaaacgcttaatcgcata
accataataagccttgctatcaccatcaagacacgtggaattgccgaggttgaacacatg
atttatctccaaccactgttagagcaaattatggcaaccagtcagcatacttggtcagaa
aagactttacgttattttcctccccttattcgtgatttcttaatggggaggatggataag
aggggacaaactatccaagcatggcagcaggcagaaactaccgttattaatcaatgcaac
cagctactgtcaccatcagctgagccgaactatgtcatgacttatttgaaccacagtttt
gctcagcatcgtcattatctttgcgccggtgcttggatgctaatgaacggacatcttgag
atcaacagcacaaatcttgctcgtgtcttgagagagttttcacctgaagaagttacagca
aatatttatacaatggtagatgttcttctgcatcatatccagcttgagcttcaacgaggg
catccagcgcaggatttactttccaaagcaatcacgaatcttgcattctttatttggaca
catgagctacttccactggacattctgctgctagctcttattgacagggatgatgatcct
tatgctttacgtcttgtgatcagtctgcttgaaagaccggaacttcagcacagaattaaa
gcattctgcagttctcgttctcccgagcattggctaaaaaatcaacatccaaaaagagct
gagctccagaaagctcttggtaaccatctctcatggaaggaccgatatccgccttttttc
gatgacattgctgcccgcttgcttccagtcatcccgctgataatttataggcttattgag
aatgatgctacagatatcgcagacagggttcttgcattttattctacctttctcgccttc
cacccactaagatttacatttgtgcgcgatattcttgcatacttctatggtcatcttcct
agcaagttaattgtcaggatcctcaatgtgctgggtgttagcaccaagactcctttctca
gattcctttgctcaaacattagggtcgtcaaactcttctatttgcccgccaccagaatac
tttgccaaccttttgctaggccttgttaataatgtcatacctcctttgagtagcaagtcc
aaatcaaatccagcagatgcttctggaaatacagcacgcacaagtttcagcaagcctcat
gcatctgcgcaagctggtggaagtagtaatgccgatggtcagagggcattttatcaaaat
caggatcctgggtcatatacacaacttgttttggaaacagcagctattgagattctatca
ctttctgtgccagcttctcaaatagtgtcttctctagttcaactaatagcacatgtacaa
ggaacgcttatacaatcaaatagtggccaaggaatgtctggtggtttgggccagaactct
gggctgccaacttcaccttcaggcgggggtgctgaatctgcagctgccaaccgagcaaac
acttctgcaagtggaatcagtgctaactttgtttctagaagtggctactcctgccaacaa
ttatctgttttgatgattcaagcatgtggcttcttgctggcacaactcccaccagaattt
cacatgcaactatactcggaagccgcccgaatcataaaagattgtcgttggcttgctgac
agttccagacctgttaaagagcttgactctgctgttggttatgcacttctggacccaaca
tgggcttctcaagataatacatcgacagccataggtaatattgttgcccttctacactca
ttttttagcaatcttccacaagagtggctggaatcttcacataccgtcatcaaacatctt
cggccagtgaattcagttgccatgttgagaattgcgtttcgcatattgggccccttattg
cctcgtctagcctttgctcgacctctattcatgaagacattggctttgttgttcaacgtg
ttaggagatgtatttgggaagaattctcagtcctcgcctcatgtagaggcatccgaaatt
tcagacatcatcgacttcttgcatcatgcggtcatgtacgaaggtcaaggcggccccgtt
cagagtactagcaaacctaaagtggagatattgacattgtgcgggaaagtagtggatatg
cttaggcctgatgtgcagcacctcctctcccacctgaagacggatccaaactcctcaatt
tatgcagcgacccatccaaagctagtacagcacccgtcctaa
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integrated database retrieval system
