Lolium perenne (perennial ryegrass): 127307135
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Entry
127307135 CDS
T08650
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
lper03015
mRNA surveillance pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127307135
09122 Translation
03013 Nucleocytoplasmic transport
127307135
03015 mRNA surveillance pathway
127307135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127307135
03041 Spliceosome [BR:
lper03041
]
127307135
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
127307135
Spliceosome [BR:
lper03041
]
Common components
Common spliceosomal components
Cap binding complex
127307135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
127307135
NCBI-ProteinID:
XP_051193797
LinkDB
All DBs
Position
6:complement(155768703..155772872)
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AA seq
240 aa
AA seq
DB search
MASLFKDPSKLSVYRDRRFTGTQEEFEAALLASLTVYVGNMSFYSTEEQAYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGVGFQTNAPPQFDRADRKRG
YNDRNDRDYQRRRSGPDTSRRAPDSDSRRDANQEPEKNPRFREKGDSDEEEDDYDKKRRR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcttcaaggacccgagcaagctgtcggtgtaccgggaccggcggttcacc
gggacgcaggaggagttcgaggcggcgctgctcgcgtcgctgacggtgtatgtggggaac
atgtccttctacagcacggaggagcaggcctacgagctattctcccgcgccggcgagatc
aagaagatcatcatgggcctcgacaagaacaccaagaccccctgcggcttctgcttcgta
ctgtactactccagggaagatgctgaagatgcagtcaaatatattagtggcacaatgctt
gatgatcgcccaattcgtgttgattttgattggggctttcaagaaggcaggcaatggggc
cgtggaaggagtggtggacaagttagagatgagtaccgcacagattacgatcctggaagg
ggtggctatggcaagatggttcagaaagagctagaagcacaaagagagttggttgactat
ggtgtaggttttcaaacaaatgctccacctcagtttgacagagctgacaggaagagagga
tacaacgaccggaatgacagagattaccaacgaagacgctctgggccagatacctccagg
agagcacctgactcagactctaggagagatgcaaatcaagagcctgagaagaatcccaga
tttcgcgagaaaggtgattctgacgaggaagaagatgattacgataagaaacgccgtcgc
tga
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