Lolium perenne (perennial ryegrass): 127307451
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Entry
127307451 CDS
T08650
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127307451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127307451
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
127307451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Tas3-like_N
Motif
Other DBs
NCBI-GeneID:
127307451
NCBI-ProteinID:
XP_051194143
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Position
6:105279447..105282031
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AA seq
710 aa
AA seq
DB search
MPRATFSSGRPPSSSSAESGWNPSISSTVDTSIASLIERATSTTAPSVDPVLLRAIKSSA
RASDGAIRDAFRLLLSLMSKPHSHVRLLAFSIVDELFMRSKLFRSLLADALDGFVPLAVG
FRSDDQLPPPAASASTLRKSAIQALERWHHLFGVHYRQLRLAVEYLKESARIQFPGIRAA
VEARAAREARTQEILTAKVDQLRQDIASIKAEIRSTIQEIRNGLAIIRAEYEKFEGYADD
DDEEQEVASLAMRSIRAASLMAGEWVPETKENEAVFDALREAYRLLMSKHFGTIQDWISV
LIRVNLADNRFRDSALKELIDVKNEIRAVRGQCNDLGLDLDNVRRKKDIQEEDEDWEEGK
IEVPSPARAESSADVAGSSKDTRKGKGVVCGVNSGDTDMPNAGNTSQEMDPERARLLAEA
PLVSWSSVLDRWGSNGDAHVNQRGLELDSHWGRMDNDAVIPAAKIAELNVHHSVYKEEPV
EILPCRAPLKKGGLCQRRDLKICPFHGPIIPRDSQGKPIGLNDGSSGAGGDPVEQSADIC
DAGGRIPIESNGSSDGEYTPEPSPSMTTNSNNDTGVMDGAHNLGKNTMDQLARQAIKNVR
KRDMDEKAREKAQRVRIRQHNEDVLRQAAIASTPHSAAAYDQPSETLGRRGRRRGKTKEP
TLASMLKKKVTTKDRIAERLLNARARDAATREASHNEDMTYREAFPNQWQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgcgacattctcctccggccggccgccgtcgtcgtcgtcggcggagtcgggc
tggaacccctccatctcgtcgacggtggatacgtctatagcgtccctcatcgagcgcgcc
acctccaccaccgctccttccgtcgaccccgtcctcctccgcgccatcaagtcctcggct
cgcgcctccgatggcgccatccgcgacgccttccgcctcctcctctccctcatgtccaag
ccccactcccatgtgcggctcctcgccttcagcatcgtcgacgagctcttcatgcgctcc
aagctcttccgctccctcctcgccgacgcgctcgacggattcgtcccgctagccgttggc
ttccgcagcgacgaccagctcccgccgccggctgcctccgccagcacgctccgcaagtcc
gccatccaggcgctcgagcgctggcaccacctcttcggcgtgcactaccgccagctccgc
ctcgccgtcgagtacctcaaggagtccgcccgtatccagttccctggcatccgcgcagcc
gtcgaggctcgtgcggcgcgggaggcacgcacgcaggagatcttgactgccaaggttgac
cagctgcgccaggacattgcgtccataaaggctgaaatccgatccaccatccaagagatc
cgcaacgggctggcgatcatccgtgccgagtacgagaaattcgagggttatgcggatgac
gacgatgaggagcaggaggttgcttcgttggcgatgcggagtatcagggcagcgtcgttg
atggccggggaatgggtgcctgaaaccaaggaaaacgaggctgttttcgatgcgttgagg
gaggcgtaccggctccttatgtcaaagcactttggcaccattcaggattggatatctgtg
cttattagagtcaatcttgcagataaccggttcagagattccgcgctcaaggaactcatt
gatgttaagaatgaaatacgcgcggtaagaggccagtgcaatgaccttggtcttgatctt
gataatgttcgtaggaagaaggatattcaggaggaggatgaagattgggaggagggtaag
attgaagttcctagtcctgctagagctgagagcagtgcagatgttgcaggttccagcaag
gacactagaaagggaaagggggtggtgtgcggagtgaactctggtgacactgacatgcca
aatgctggcaatacatctcaggagatggatccagagagagcaaggctccttgctgaagca
cctttggtatcatggagctcagtcttggaccggtggggttccaatggggatgcacatgta
aaccagagggggcttgagctcgacagccattggggaaggatggataatgatgctgttata
cctgcagcaaagattgcagagttaaatgttcaccattctgtttataaggaagagccggtt
gagatcctaccatgccgtgcacctctgaagaaaggaggtctttgccagagaagggatctc
aagatatgcccttttcatggacccatcatcccacgtgattcacaaggaaagccaattggt
ctaaatgatggcagttctggtgcaggaggtgatcccgttgagcagagtgctgacatctgt
gatgcaggaggaagaattccgattgagtcaaatggaagcagtgatggtgaatatacgccg
gagccctctccttcaatgactacaaacagtaacaatgacactggcgtcatggatggagct
cataatcttggtaaaaatacaatggatcagctggcgaggcaagcaattaagaatgttcgg
aaaagggacatggatgagaaagcgcgtgaaaaagcccaacgtgtgagaatccgtcagcat
aatgaagatgttctgcgacaagccgctattgcttcaactccccactcagcggcagcatat
gaccaaccttctgaaacactgggccgacggggtcgacggcgaggtaaaacaaaggaaccc
acactagcatcgatgctgaagaaaaaagttaccacaaaagataggattgcagagaggctc
ctaaatgctcgagctagggatgcagccacaagagaagcttctcataatgaggatatgacc
tacagggaagcattcccgaatcagtggcaatga
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