Lolium perenne (perennial ryegrass): 127307548
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Entry
127307548 CDS
T08650
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127307548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127307548
03036 Chromosome and associated proteins [BR:
lper03036
]
127307548
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127307548
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127307548
PBAF complex
127307548
GBAF(ncBAF) complex
127307548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
127307548
NCBI-ProteinID:
XP_051194230
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All DBs
Position
6:66117174..66120903
Genome browser
AA seq
504 aa
AA seq
DB search
MATPPAPVPPATASTAPVPPPPQAPYKAPPFSQPPSTAGTVKAEIPPAAASTAPHTAVAA
AAAGPATQDSPYIINVPSYSAWFSYGAVSDTERRLLPEFFEGEAGTRGPEAYTYYRDTLV
RRFRARPARRLTLTEARRGLIGDVGSVRRVFDFLEEWGLINYGASAPGVKQGRDKREEAA
AASQSSLPAGAAMSRKLCVGCSSVCGSAYFTCEKKNAFTFAYDQAEINICCRCYVRANYR
PGLTPADFKKVEISEDAKSDWTDKETLHLLEAVLHYGENWKKVSEHVGSRSEKDCIARLI
RLPFGEQFMGSKDQKLQFETDDDVADESRAEISKRLRLTPLADASNPIMAQVAFLSAIVG
SGVAAAAAQAAISAQSQVDMSDSLVDSSISSTKEEESPYTNGFSANDLLKEASANAQVQL
EKEQKDIEQSLSDIVDVQMKEIQDKINRFEQKELLMERERQQLHHLRELLFIDQLAVVQH
QSRPHLVIAENNEEEKPKPVTITS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccgccggctccggtgccgccggccaccgccagcaccgcgccggtgcctccg
cctccgcaggcgccgtacaaggcgccgcccttctcccagcccccctccaccgccggcacc
gtcaaggcggagatccctcccgccgccgcctcgaccgcgcctcacaccgcagtcgccgcc
gccgccgcgggacccgcgacccaggactcaccgtacatcatcaacgtccctagctactca
gcctggttctcctacggcgccgtcagcgacacggagcgccgcctcctgccggagttcttc
gagggggaggccgggacccggggccccgaggcgtacacgtactaccgcgacaccctcgtg
cggaggttccgggcgaggccggcgcggcggctcacgctcaccgaggccaggcggggcctc
atcggcgacgtcggctccgtgcgccgcgtcttcgacttccttgaggagtgggggctcatc
aactatggcgcctcggcgcccggggtgaagcaggggagagacaagagggaggaggcggcg
gcggcgtctcagtcttccttgcctgctggggcggccatgtccaggaagctctgcgtaggg
tgcagcagcgtctgcggctctgcctatttcacctgtgagaagaaaaacgccttcactttt
gcgtatgatcaggcggagataaatatctgttgtagatgctatgtacgtgccaactaccgg
cctggtcttactccagcagacttcaagaaagttgaaattagcgaagatgcaaaatcagat
tggacagacaaggaaactcttcaccttcttgaggctgtcttgcattatggagaaaattgg
aagaaggtttctgaacatgttggtagtcgatcagagaaagactgcattgctagactcatc
cgattaccttttggagaacagttcatgggatccaaggatcagaagttgcagtttgagact
gatgatgacgttgctgatgaatctagagcagagatctcaaaacggcttcgtctcacacca
ctggcagatgcaagcaatccaataatggctcaggtggcgttcttgtctgccattgttggc
tcaggagttgcggcagcagcagctcaagcagctatctctgcacaatcccaggttgatatg
agtgacagcctggttgattcttcaatcagcagcaccaaggaagaagaatctccctacacc
aatgggttttcagccaacgatttactcaaagaggcatctgcaaatgcacaagtgcagctt
gaaaaggaacagaaggatatagagcaatctttatccgacatagtggatgtccagatgaag
gaaatccaagacaagataaaccgttttgagcagaaggagttgctaatggagagagagagg
cagcagctccatcatttacgggaattgcttttcattgatcaacttgcggttgtgcagcat
cagagcagaccgcaccttgtgattgctgagaacaatgaggaggagaaaccaaaacctgtt
accatcacgagttaa
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