Lolium perenne (perennial ryegrass): 127307594
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Entry
127307594 CDS
T08650
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127307594
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
127307594
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
DUF4348
Motif
Other DBs
NCBI-GeneID:
127307594
NCBI-ProteinID:
XP_051194286
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Position
6:complement(68219961..68221547)
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AA seq
420 aa
AA seq
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MVDAGRRSNGAALMVALCAALLGTACATKPAAKPAAAAAVDVGGPPSVPAGPLDITKLGA
KGDGKTDSTQAIMQAWKNACGATGTQKIVIPEGNFLIGALELSGPCTSSIIIRLDGNLLG
TGDLNAYKKNWIEFMRVDNFAVNGHGTIDGQGPLVWGKNECNKNYNCKILPNSLVLDYVT
NASIRGVTLKNAKFFHLNLFNCKNVLVEKVNITAPGDSPNTDGIHMGDSENVTIKSTNIA
VGDDCISIGPGTKHVKIHGSRCGPGHGISVGSLGRYKDEKDVEDIEVTNCTIKGATNGLR
IKSYEDSKSQLKATKFVYDQVVMDNVSYPIIIDQKYCPNNICSKTGLSKVTVNDIVFKNI
VGTSATPEAVTLNCANNLPCQGVQLVNVNLKYTGTHNKTMAVCHNAVGKSSNVIKELACL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgcaggaagaagaagcaatggcgccgccttgatggtggcgctgtgcgcggcg
ctgctgggaacagcctgcgcaacgaagccggcagcgaagcctgccgctgcggcggcggtt
gatgtgggcggtccgccatcggttccggcgggtcccctggacatcacgaagctgggggcg
aagggcgacggcaagaccgacagcacgcaggcgatcatgcaggcgtggaagaacgcgtgc
ggcgccactgggacgcagaagatcgtcatcccggagggcaactttctgattggcgctctg
gagctgtcggggccctgcacgtccagcatcatcatccgcctcgacggcaacctcctcggc
accggcgacctcaacgcctacaagaagaactggatcgagttcatgcgcgtcgacaacttc
gccgtcaacggccacggcaccatcgacggccagggccccctcgtctgggggaagaacgag
tgcaacaagaactacaactgcaagatcctccccaacagcctggtgctggactacgtgacg
aacgcgtcaatccgtggcgtgacgctgaagaacgccaagttcttccacctcaacctcttc
aactgcaagaacgtgctggtggagaaggtgaacatcacggcgcccggcgacagccccaac
acggacggcatccacatgggcgattccgagaacgtgaccatcaagtccaccaacatcgcc
gtcggcgacgactgcatctccatcggccccggcaccaagcacgtcaagatccacggctcc
cgctgcggccccggccacggcatcagcgtcggcagcctcggccgctacaaggacgagaag
gacgtcgaggacatcgaggtcaccaactgcaccatcaagggcgccaccaacggcctccgc
atcaagtcctacgaggactccaagtcgcagctcaaggcaaccaagttcgtctacgaccag
gtcgtcatggacaacgtctcataccccatcatcatcgaccagaagtactgcccaaacaac
atctgctccaagaccggcttatccaaggtcaccgtcaacgacatcgtcttcaagaacatc
gtcggcacctccgccacgccagaggccgtcaccctcaactgcgctaacaacctcccatgc
caaggcgtgcagctcgtcaacgtcaacctcaagtacactggcacacacaacaagaccatg
gccgtctgccacaacgccgtcggcaagtccagcaacgtcatcaaggagctcgcatgcctc
tag
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