Lolium perenne (perennial ryegrass): 127308044
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Entry
127308044 CDS
T08650
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127308044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127308044
03041 Spliceosome [BR:
lper03041
]
127308044
03032 DNA replication proteins [BR:
lper03032
]
127308044
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
127308044
Spliceosome [BR:
lper03041
]
Complex A
U1 snRNP components
Sm proteins
127308044
U2 snRNP components
127308044
Complex B
U1 snRNP components
127308044
U4/U6.U5 tri-snRNP components
127308044
Complex C
U2 snRNP components
127308044
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
127308044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
127308044
NCBI-ProteinID:
XP_051194768
LinkDB
All DBs
Position
6:complement(55910954..55913590)
Genome browser
AA seq
86 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL
GEILIRCNNVMYMRGVPEDTEIEDAE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtaccagttaacccgaagcctttcctgaacaacctgacagggaaacctgtt
attgtcaaactgaagtggggtatggaatacaaagggtaccttgtctctgtggactcctac
atgaatctgcagcttgctaacacagaggagtacattgatgggcaattctctggaaacctt
ggagagatactgataaggtgcaacaacgttatgtatatgcgcggcgttccggaggatacc
gagattgaggatgcagagtga
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