KEGG   Lolium perenne (perennial ryegrass): 127308314
Entry
127308314         CDS       T08650                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127308314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lper03021]
    127308314
Enzymes [BR:lper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127308314
Transcription machinery [BR:lper03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127308314
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 DUF4726
Other DBs
NCBI-GeneID: 127308314
NCBI-ProteinID: XP_051195051
LinkDB
Position
6:complement(38668295..38684645)
AA seq 1915 aa
MEEDQSAVLVAEGSIKSIKLSLSTEAEICTYSINDCPVTHPSQLGNPFLGLPLESGKCES
CGASENGKCEGHFGYIELPVPIYHPCHVSELRQLLTLVCLKCRRMKKAKGKQSNGKENVS
VTACHYADCRALPALSVKETKTTDGAFRLELKAKKHMTERSWNFLDQYGFHYGGASHNRI
LLPEEALNILKKIPDETKKKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDI
SISLLKKVLQKIEQIKKSRAGPPNFESHDVESSDLQLSIGQYIQLRGTTKGPQDAKRYAI
STDSSHLSTKQWLDKMRTLFISKGSGFSSRSVLTGDPYIGVDVVGLPSEVAKRITFEEQV
TDININRLQEVVDKGDCLTYRDGETTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRP
PSTHKHSLQAFKVYIHDDHTVKINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELFSV
EKQLTNSHNGKINLQLANDSLLALKHMSSRTMLSKESANQLAMLLSLSLPAPAVVKSKPY
WTISQILQSALPAELTCEGDRFLVKDSTVVKLDLAKESVQASFSDLVSSINCVKGPGDAL
KFLNALQPLLMEFLLLDGFSVSLQDFSVPKILLEEAQESIKTQSAVLEQSRSSKGQYVEM
RVDNNLKDVKQQISDFVVKSSHLGLLIDPKSDPSVSKVVQQLGFVGLQLYREGKFYSSRL
VEDCFSNFVNRHPPVGNEVQHPPEAYGLVQSSYFHGLNPYEELVHAISTRETIVRSSRGL
TEPGTLFKSLMAILRDVVVCYDGTVRNICSNSIMQLKYREEDATDFPSDITPGEPVGVLA
ATAISNPAYKAVLDASQSNNTSWELMKEILQTKVNYKNDTKDRKVILFLNDCSCPKKFCK
EKAAIAVQGCLKKVTLEDCATDICIEYQKQTSLDGISEATPAFVGHIHLQKAHLETINIS
TEDILHKCQEVSVKHGMKKGHLAHLFKKITFSTCDCSFTQKPIDGKVPCLQFSFSEDIPM
LSESVEKAVNVLVDSICGVLLDNIIKGDPRIQEAKITWVGSDATSWVKHTKKASKGEPAV
EIVVEKGEALQNGDAWRIAMDACIPVMNLIDTRRSIPYGIQQVRKLLGIACSFDQVVQRL
STTMKTVAKGILKDHLVLVANSMTCTGNLNGFNNAGYKATFRSLKVQVPFTESTLFTPMK
CFEKAAEKCHSDSLGCVVSSCSWGKHAALGTGSSFEILWNENQLKSNKEYGDGLYDFLAL
VRTDQEKARYTFLDDVDYLIEDNALSPELDGMPTFDDCLEEQPTDQGNSSWNVPATVENE
SADWGGWGADKAKDKKTMPEEPAGLNTWADQSAKKDTDGGGRNWGKQPADQDSSWNVPAA
VENESADWGGAEKAKAKRTMPEEPAGLNTWADQSAKNDTDGGGRNWGKQPADQDSSWNVP
AAVENESADWGGWGSEKGKDKKSVPEEPAENNTRADQSSKKDSDGGGGNWGKQPNMPASP
SVSAWGKKNSDGGDGTWEKQASSCKKNVDQASWGNEPVPPSRNTWDDKASKPHTDAHNDS
WGSVAANTRTSTAEDVPWGSTQTSSAEHMDAQNDSWENVAAKAASLSDNAWNAAPVSQGN
ENSEAKEPDAWDGWGSAQAKDSSTDDLNKSDASNNSKGWKSDGWAAKESRRDQRDNLGRP
PMRPVERPPRPRFELPADAKTILHEIEPIVLSVRKIFRESCDGVNLSLEDEKFIKEKILE
HHPEKDKKLSSETDHIVVNKHHTFQESRCFYVVSSDGTQTDFSYIKCLDNYVRKSYAEEP
AELVSQMYFQRRNRDRAPAEASQPTLAETSQATPQEAQLETPAPLAETASQEALASPSAT
QQETPAATPQETPAATETAPAATPQETLAATVNKWAEKPDSDSAWGAGASDDKWA
NT seq 5748 nt   +upstreamnt  +downstreamnt
atggaggaggaccaatctgcagtactggtcgctgaaggttccatcaagagcatcaaactt
agcctatccacggaggctgagatatgtacttactctataaacgactgtcctgttactcat
cccagtcaacttgggaatcctttccttggcttaccacttgagtcagggaaatgcgagtca
tgtggtgcctctgaaaatggcaaatgcgaagggcattttgggtacattgagctgcctgta
cctatatatcatccatgccatgtcagtgaacttaggcaattactgaccttggtatgtttg
aagtgccgtcgtatgaagaaagcaaagggcaaacagagcaatggaaaggaaaatgtgtca
gtaacggcatgccactacgctgactgtcgggctctcccggcactatctgtgaaggaaacc
aagacaacagatggtgcatttcgtttagagctgaaagcgaagaaacacatgacggaacgt
tcttggaacttccttgaccaatatggatttcactatggtggagcctcccacaataggata
ctgcttccagaagaggctctgaatatattgaagaagattccagatgagacgaaaaaaaag
ctagctgcacggggatacattgctcagtctggttatgtgatgaaatatcttccagtaccc
cctaactgcctctatattccagaattcacagacgggcagagcatcatgtcctatgacatc
tctatatctttattgaagaaggtacttcaaaagatagagcagataaaaaaatcaagagct
ggtcccccaaacttcgaatcacatgatgttgaatcaagtgatttacaactttctattggc
caatacatacagctcaggggtactacaaagggtcctcaagacgcaaagagatatgcaatt
agcactgattcatcgcatttatcaacaaaacaatggttagataagatgaggacattgttc
atcagcaaagggtcaggattttcatcacgtagtgtacttactggagatccttacattgga
gtagatgtagttggcctgccttctgaagtggcaaaaagaataacttttgaagaacaggtt
acggacatcaacattaacagattgcaagaggttgttgacaagggagactgtttgacctac
agagatggtgaaacaacatatgcaatcactgtaggatcaaaaggatatacaacacttaaa
gtgggtcaaacgatcagtagaagaatcgttgatggtgatgttgtgttcctgaacaggcca
cctagtactcacaagcattctctccaggcatttaaagtatacatccacgatgatcataca
gtcaaaatcaatccccttatatgctctcctcttgcagcagattttgacggtgattgtgtg
catatttattaccctcagtcacttgctgcaaaagctgaagccttggagcttttcagtgtg
gagaagcaactgacgaattcacacaacggaaaaataaacctacagctagctaatgacagt
ttgctagctctgaaacacatgtcttcaagaaccatgttaagcaaagaatcagctaaccag
ctggccatgcttctgtccctttctcttcctgcccctgctgtggtcaagtcaaagccatac
tggacaatctcacaaatattgcaaagtgcgttgccagcagaattgacttgtgaaggggac
agattcctagtcaaggacagcaccgtcgtaaaactggatcttgcaaaagaatccgtccag
gcctcattctcggatctagtgtcttccattaattgtgtaaagggtccaggagatgcactc
aaattcttaaatgcgctgcagcccttgttgatggaatttttacttctggatggttttagt
gtaagtctgcaagattttagtgtgcccaagattctgttggaagaagcacaggaaagcata
aaaacacagtctgctgtactggagcagtcaaggtcctcgaaaggccagtatgtggaaatg
cgggttgacaacaatctaaaggacgtcaaacaacaaatttcagattttgtcgtgaagtcc
tctcatcttggtcttttgattgacccaaagagtgacccatcagtgtcaaaagtagttcaa
cagcttggttttgttggtctgcaactctaccgcgaggggaagttctactcgagccgtctc
gtggaggactgtttctcaaattttgtgaataggcacccacctgttggaaatgaagtccag
catcctccagaagcttatggtcttgtgcaaagttcatatttccatggtctcaatccttat
gaggagctggtacatgctatatccacgagagaaactatcgtccgctcctcaagagggttg
acagaaccaggaactctgttcaagagtctaatggccatcctgcgagatgtagttgtatgc
tatgatggaactgtgagaaacatctgcagcaattcaatcatgcaacttaagtacagagaa
gaagacgccaccgattttccaagtgatataactcctggagaaccggtgggtgtcttagct
gccactgctatctccaaccctgcttacaaggctgtcttggatgcttctcaaagtaataat
acttcatgggagttgatgaaggaaatacttcagacgaaagttaactataaaaatgatacg
aaagatcgaaaagttatcctgtttcttaatgactgctcttgtcccaagaagttctgcaaa
gaaaaggctgctattgcagtacagggctgtctaaagaaagtcactctagaggactgtgcc
actgatatctgcattgagtatcagaaacaaacaagtttagatggaatttcagaagctacc
ccagcatttgttggtcatattcaccttcaaaaggcacatttagaaacgataaacattagc
accgaggatattcttcataaatgccaagaagtttctgtgaaacatgggatgaagaaagga
catcttgcacacctgtttaaaaagattactttctctacttgtgattgttccttcacacaa
aagccgattgatgggaaggttccatgtttgcagttttctttttctgaggacattcctatg
ttatctgaatctgttgagaaagctgtgaatgtgctagtcgattctatatgtggtgtgctt
ctggataatattataaaaggtgatcctcgaattcaagaggccaaaattacgtgggttggg
tctgatgcaacgtcttgggtaaaacacacaaagaaggcatcaaagggtgagccagcagta
gaaattgttgttgagaaaggtgaagctttgcaaaacggtgacgcatggagaatagcgatg
gatgcatgcatcccagtaatgaacctcatcgacacacgaaggtccataccttatggtatt
cagcaagtgcggaaacttcttggcatagcatgctcctttgatcaagttgtccagcgcctt
tcgacaactatgaaaacggttgctaaaggaattcttaaggaccatctggtacttgtggca
aacagcatgacatgcaccggtaacttgaatgggttcaacaatgctggttataaggcaacc
ttccgttcattaaaagttcaagtaccttttacagagtccaccttattcacccctatgaaa
tgctttgagaaggctgccgagaaatgccattcggattcattgggttgtgtggtctcatca
tgttcgtggggcaagcatgcagcacttggcactgggtcatcttttgagattctttggaac
gaaaatcagctaaaaagcaacaaggagtatggtgatggcctgtatgatttcctggccttg
gtgaggactgaccaagaaaaggctagatacacattcttggacgatgtggactaccttatt
gaagacaacgcgttatcaccagaattggatggtatgcctacttttgacgattgtcttgaa
gaacagccaacagatcaaggcaattcatcttggaatgtccccgcgacagtggagaatgaa
tccgctgattggggaggctggggcgctgataaggcgaaggataagaagactatgccagaa
gaaccagctggactcaatacttgggctgatcagagtgctaagaaggatacagatggaggc
ggtcgtaactgggggaagcaaccagcagatcaagattcatcttggaatgtgcctgcggca
gtggagaatgaatcagctgattgggggggcgctgaaaaggcgaaggctaagaggactatg
ccagaagaaccagctggactcaatacttgggctgatcagagtgctaagaatgatacagat
ggaggcggtcgtaactgggggaagcaaccagcagatcaagattcatcttggaatgtgcct
gcggcagtggagaatgaatcagctgattgggggggctggggcagtgaaaagggaaaggat
aagaagagtgttccagaagaaccagctgaaaacaacactagggctgatcagagttctaaa
aaggattcagatggaggtggtggtaactggggtaagcagccgaacatgccagcatcacca
tcagtcagtgcatggggcaaaaagaattctgatggaggtgatggtacctgggaaaagcaa
gccagctcttgcaagaaaaatgttgaccaggcctcttggggaaacgagccagtgccaccg
tcaagaaatacatgggacgacaaggcgtctaagccgcatactgatgcacataatgattcc
tggggaagtgtggcagctaatactcggacttctactgcagaagatgttccttggggaagt
actcaaacttcttctgcggagcatatggatgcacagaatgattcctgggagaatgtggct
gcaaaggctgcttcactgtcagataatgcatggaatgctgctccagtttcccagggaaat
gagaattcagaagcaaaggagccagatgcttgggatggctggggttctgctcaagccaag
gactccagtactgatgatttgaacaagagcgatgcttctaacaacagcaaaggctggaaa
tcagatggatgggctgccaaagaaagtcggagagaccaaagagacaatctgggtaggccc
ccaatgagacctgtggagaggccaccaagaccacggttcgaactaccagctgatgcaaaa
acgattttacacgaaattgaacctattgtattatcggtcagaaagatcttccgtgaatca
tgtgatggtgtaaatctttccctggaggatgagaagttcatcaaggagaagattctggag
caccatcctgaaaaggataagaagctgtcctctgaaactgatcatatagtggttaacaag
caccacacgttccaggagagtcgctgcttttacgtggtgtcatcagatggaacacagaca
gacttctcctacatcaagtgcctggacaattacgtgaggaagagctatgcagaagagccc
gccgaactggtctcccagatgtacttccagaggcgcaatcgtgatcgagcaccagctgag
gcttctcaaccaactctagcagagacctcacaagccactccacaggaggctcagctagag
actccagccccacttgcagaaacagcttcacaagaggctctggcttctccgtcagcgacc
cagcaagagaccccagcggcgactcctcaggagactccggcagcgacagagaccgcccca
gcggcgactccacaagagactctggcagcgacagtcaacaagtgggctgaaaagccagat
tctgattcagcgtggggcgcaggagcctccgatgataagtgggcctga

DBGET integrated database retrieval system