Lolium perenne (perennial ryegrass): 127308391
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Entry
127308391 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127308391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127308391
03036 Chromosome and associated proteins [BR:
lper03036
]
127308391
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127308391
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127308391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
127308391
NCBI-ProteinID:
XP_051195158
LinkDB
All DBs
Position
6:32176317..32191825
Genome browser
AA seq
1513 aa
AA seq
DB search
MAAPASGSRRIAGTEVPITGSDKVRWIDLTVPSSPAAAPASPADPFVSVPPRAASGCHVV
SSGGESQRYLAWRIHEEHQNVLEVIELCASKEFPSSGLRLVFQEALCPFAFMCESEGARR
GESVYLLYVLTISGVALLCNLRSPFSYVSGSILSQNDVLEFSLQTHTQSANVTAVKAKPG
CLVIGRQDGSICCYSLGKLAPSSSGFSNELRDDAGIGRLWTLVSRTKALGPVQDIDTATV
NERELLFALHLDGSLRVWDISSHTKLLNYNVHPNDFEGQPSRVWVGEADDDQELISLAVL
HQGTMVPACDRVVVYGFSFGAGERFLLSPEPLVSAIPLLEGKLVDLKISTEKLWILKEVG
PLLYEIVQYDSDGEEICSYVLQEDAISEQMFQSSESALDDLVWTADSIFSSMKEHSFSFI
SSMFLRRLLQPGVNHCSALRETLLEYKRFLSDSEFQSLTTSGLRKEILSIIEHEGSSQSA
SSTAYHWKKFSARYLHKWCANNRPYGLFLDMNREVFGLVRKGSFSLFRCLEGVEQLIYGS
SDELGNLEGLEMNLFDDVSDTETLIEVLRCMGHINHLLGRSSAAIYYESLISSVVSPDEI
ASQILKILESGFSPQSSSPLITLLGTDAYVERRQMAHKSQRKFSVEMLLSFHKLQSRSTS
WSAVFDVIEKFMKCLNTKVTIQEHELKRLCNVNSTILVQATSQVARTMFESAFDLFLFLS
YLVGVGGQVSLLQSDVSRIKLKLFPMIQDILGQWIVLHFVGISPTTPPAMEDFSYQLSYL
QLGIADEVSLHRKLGSSDFTLACLLDFPKSAEGDHLSACFPSTAEVIDLVRQFISSIMCR
NNFDHANSFLGSTINLAAVFVRHGQYEAAQNLLGILDTYLNYARASQTDQDTDIACSARL
HLNGFCLLMLAHDEANIVLRESRVHEAIRCFFRAASGQEAPKALKKFSSETGFQISGECE
SISLWRLHYYEWAMQKFEQNSMSEGACQFALAALEQVDSIVDLDNGSEVEGLPETAQMIK
GRLWANVFKYSLDLKNFRDAYCAIVSNPDDDSKYVCLRRFIIVLCELGETKVICNGEIPF
TGLLEKVEQELFWKAERSDVSSRPNLYKVLYSFEAYRNNWRKAAAYMYRYFVRLSREGDA
GGSCQLSHVLQEKLHALSTAINSLQLVEPSCAWLDSVCEADDQTSPSKKPRNNLLMENSA
FGTDSELSRLQFCVDIEILEKEYTLTEALYMLNTVNSRSKSHESHSIEALTDILINENLY
DLAFTVVLKFWKESGMKRELERVFAAIAQQCCPNRVGNSGRNFTDPQQLLLLPSSEDDAR
DGGSKTIAVAHQVQGSCQWETLELYLDKYKDLHPRLPVIVAETLLYADPEIELPLWLVQM
FKTTKGGNRMISWGMCGKEADPAALFRLYTNYGRHAEAANLLVEYLDSFASSRPVDVLHR
KKMSAAWFPYTTIERFWCQLEEMQIAGHSADQCDRLKKLLHGALMKHLQQVVVDSEDVLS
SVGGGQGVESQSN
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccccgcctccggctcccgcaggatagcgggcaccgaggtccccatcacgggc
tcggacaaggtgcggtggatcgacctaaccgtcccgtcctcccccgccgccgcgccggcg
agccccgccgacccgttcgtctccgtgcccccgcgcgccgcctccgggtgccacgtcgtg
tcctccggtggcgaatcccaacgataccttgcctggaggattcatgaagaacaccaaaat
gtgctagaggtcattgaactctgtgcttcgaaggagttcccaagctctggactgcggttg
gtattccaggaggctctatgtccatttgcttttatgtgtgaaagtgagggtgccaggcga
ggcgaatctgtatatctgctatatgtgctcactatttctggagttgctcttctgtgcaac
ttgcgcagcccattttcctatgtatctggatcaatactgtctcagaatgatgtacttgag
tttagtcttcaaactcacacacagagtgctaacgttacagctgtaaaagcgaaaccaggg
tgtctagtaattgggcggcaagatgggtcaatctgctgttacagtctcggcaaactagct
cctagttcatcaggtttctcaaatgagctccgtgatgatgctggaattgggcgtttgtgg
actctcgtgtcgagaacaaaggctctggggcctgtacaagatatagacacagctactgta
aatgaaagggagctgttgtttgctcttcatttggatggaagtttgcgtgtatgggatatt
tctagtcacacaaaacttcttaattataacgttcacccgaatgattttgaagggcaaccc
tctagggtatgggttggtgaggctgatgatgatcaagagctgatatctttggctgttctc
catcaaggcactatggttccagcttgtgatcgtgttgttgtatatggcttcagttttggt
gctggtgaaaggttcttgctgtctcctgaacctttggtttctgctatacctttgctggag
gggaagctcgttgatttgaaaataagcacagaaaagctttggattcttaaagaagtggga
ccactgctgtatgaaatagtgcagtatgactctgatggtgaggaaatatgttcatatgtg
ctacaagaagatgctatcagtgagcaaatgttccaaagttctgaaagtgcattggatgat
ttggtttggactgctgattcaatattctcatctatgaaggagcatagtttcagttttatc
tcgtcaatgtttctgcggaggctgctgcaaccaggagtgaaccactgttctgctcttcgt
gaaaccttactggagtataaaaggtttctatctgattcggagttccagtcattaactact
agtgggctacggaaagaaatactatccattatagaacacgagggaagttcacagtccgca
agttctactgcttatcactggaaaaagttttctgcacggtatctccataaatggtgcgct
aacaataggccatatgggttgtttcttgatatgaaccgcgaggtgtttggtttagttaga
aagggttcattttctctcttccgttgtttggagggtgtggagcaacttatttatggttcc
tctgatgaactgggaaatcttgaaggcctcgaaatgaacttatttgatgatgtatctgat
actgaaacccttattgaagttctcaggtgcatgggccatataaaccatttgcttgggagg
tcttctgctgcaatatattacgagtccctcatcagttctgttgtatcaccagatgaaatt
gcttctcagatattaaagattctagagagtggttttagtcctcaatcttcgtctcccctc
attacattacttggaacagatgcttatgtagaaagaaggcagatggcccacaaaagccaa
aggaagttttctgttgagatgctgctatctttccataagttgcaatcaagatccacatcc
tggtcagcagtatttgatgtgatcgagaagttcatgaaatgtttgaatacgaaggtcacc
atacaagagcatgaattgaaaagactttgtaatgtaaattctacgatattggttcaggct
acttcacaggttgcaagaaccatgtttgagtctgcttttgatctatttctgttcctcagt
tatctggttggtgttggtgggcaggtatcattgctgcaaagcgatgtttccaggataaaa
ctgaagttgtttccaatgattcaagacatattgggccagtggattgttctccattttgta
ggaatttcaccaaccacgccaccagccatggaggatttcagctatcaactttcttacctc
cagctaggtatagctgatgaggtatctttgcacagaaagcttggatcatctgattttaca
ttggcttgtttgcttgattttcctaaatctgctgaaggggatcatctctcagcttgtttt
cctagtacagccgaggtgatcgacttggtcaggcaatttatcagttcgattatgtgcaga
aataattttgatcatgcaaacagcttcttgggttccactataaatctggcagcagttttc
gtccgacatggtcaatatgaagctgctcagaatcttctgggcattcttgatacatacttg
aactacgcgagagcatcccaaactgaccaggatactgatattgcatgttcggctcgccta
catctcaatggattttgccttttgatgcttgcacatgacgaagcaaacatagttttgaga
gaatccagggtccatgaagccatcagatgcttcttcagagctgcatctgggcaagaagct
ccaaaggcgttgaagaagttctcttcagaaacagggtttcaaatttccggggagtgtgaa
tctatttccttatggaggcttcattactacgagtgggcaatgcaaaaatttgagcagaac
tccatgagtgagggagcatgccagtttgctcttgctgctcttgaacaagttgatagcatt
gttgatttggacaatggaagtgaagttgagggtctcccagaaactgcacagatgattaaa
ggacgactatgggccaatgtattcaagtatagcttggatttgaaaaacttccgagatgcc
tattgcgctatagtctcaaatccagatgatgacagcaagtatgtctgtttgaggcgtttc
atcatagttctttgtgagcttggcgagactaaggtcatctgtaatggtgagataccattt
actggtttgttggaaaaagtggagcaagaactcttctggaaggctgagcgctcagatgta
tcttctagaccaaatctatacaaagtcctttattcatttgaagcctataggaacaattgg
aggaaagcagctgcatacatgtacaggtattttgttagattgagtagagagggggatgca
ggtggaagctgccaactttctcatgtattacaagagaagctgcatgctctgtctactgct
atcaactcgttgcagcttgttgaaccctcatgtgcctggctcgattcagtttgtgaagct
gacgatcaaacttcaccaagcaaaaagcctcgtaataatcttttgatggagaactctgcg
tttggcacagattcagagctctccagattgcagttttgtgttgacatcgaaattcttgaa
aaggaatatacattaacagaagcactttatatgcttaacactgtaaattctagatccaaa
tctcacgaaagccattctattgaagccctgacggacattcttataaatgagaatttgtat
gacctggcattcaccgttgtactgaaattttggaaggagtcaggaatgaaaagagaattg
gaacgtgtctttgcagccattgcacagcagtgctgcccgaacagagtaggcaactcaggg
agaaattttactgacccccaacaactgctactgctaccttcttctgaggatgatgcacgg
gatggcggtagcaagaccattgctgtggcccatcaagtgcagggaagttgccagtgggaa
actcttgaactatatttggataaatataaagatttgcatccgaggttgcctgtcattgtt
gctgaaacacttctttacgctgatcctgagattgagctacctctttggctggttcagatg
ttcaagactaccaagggtggaaataggatgatttcatggggaatgtgcggcaaagaggca
gatccagctgcattgtttcgtctgtatacaaattatggccggcacgcagaagcagccaac
ttattggtggagtacctggattcttttgcatcatcgagaccggtggacgtgctccaccgc
aaaaagatgtctgccgcctggtttccgtacaccacaatcgagaggttttggtgtcagctt
gaagagatgcaaattgctggccatagcgccgatcagtgtgatagactcaagaagttgctg
catggagccctgatgaagcacttgcaacaagtggttgtcgattcagaagacgtgctgtca
tccgttggagggggtcaaggagtggagagccaaagcaactga
DBGET
integrated database retrieval system
