Lolium perenne (perennial ryegrass): 127308812
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Entry
127308812 CDS
T08650
Name
(RefSeq) vacuolar sorting protein 3
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127308812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lper04131
]
127308812
Membrane trafficking [BR:
lper04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127308812
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Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
CNH
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
127308812
NCBI-ProteinID:
XP_051195676
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Position
6:14027120..14033597
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AA seq
939 aa
AA seq
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MGSHPAPPATSRTALSPFATLDPAALAALPATTPITVRSAALSAPHLLYLGTGGGKLLLF
SLQTPSAPEFLRLVPTGATRPVSAILPLPSVSRVLLLADGALLLADPLLARPVRRLGSLR
NVAAVAASSPSPSSCSLAVAVGKKLLVIDLTLREADELEVQTREIAAGPAVDAISVLAWV
GEDSVFAGAASGYSLFSTGGGGTGQSVDIFALPESAGSPRIRPLSGGEEVMLLVDNVGVV
VDRFGHPSGSSFVFNSRPDCIAEVFPYVVVAGESKLDVYRRRNGAHLQTIAIESSRAGAL
TVASDDKVVVVATAYKVFCYIKVSAVEQIKAPLRRKSYREAISLLEEFESDGEISKDMIS
FVHAQLGFLLFFDLRFEDAVNHFLLSETMQPAEIFPFIMRDPNRWSDLVPRKRYWGLHPP
PKPLEEVIDDGLVTLQRALFLKKAGVDTVVDEDFLSNPPSRADLLELAIRNIIRYLCVAR
EKTLSPAEMEGVDTLLMYLYRALDLVDDMERLASSQNSCVVEELESLLENSGHQRTLAFL
YGSKGMCSQAVAIWRILARNYSTGLWKDRPNLPETDSHEALAEKMSGEQIAAIEASKILQ
ATSDQDLVLEHLGWVADIDQDLATAILTSEMREKQLSAEKVIAALDSGKVGIHQRYLQWL
IEDQGCDDPHYHTSYALLLSKSAMQAFHVESNSREKDDREIDSDVQFIFSLRERLQLFLQ
SSDLYDPEEVLDVIEESELWLEKAILYRKMGQENIVLQILALKLEDSEAAEQYCAEIGRD
DAYIQLLDLYLDPKNGREPMFTAAVRLLHNHGKSLDPIQVLERLSSDMPLQLASDTILRM
LRARVHHHRQGQIVHSLSLATNLDARLTRLEERSRHVQLTDESICDSCRARLGTKLFVMY
PDDSVVCYRCYRNQGDSVSRRGRNFRKDAIFKQSWLVSR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgggatcccacccggcgccgcccgcgacctcccgcacggccctctccccattcgcgacg
ctcgacccggccgcgctcgccgcgctcccggccaccacccccatcaccgtccgctccgcc
gcgctctccgcgccgcacctcctctacctcggcacgggcggcggcaagctgctcctcttc
tccctccagaccccctccgcccccgagttcctccgcctcgtccccaccggcgccacccgc
cccgtctccgccatcctcccgctcccctccgtctcccgcgtcctcctgctcgccgacggc
gccctcctcctcgccgacccgctcctcgcgcgccccgtccgccgcctcggctccctccgc
aacgtcgccgccgtcgccgcctcctccccctccccctcctcctgctctctcgcggtcgct
gtcgggaagaagctgctcgtcatcgacctcaccctgcgcgaggccgacgagctggaggtc
cagacgcgcgagatcgccgccggccccgccgtagacgccatcagcgtgctcgcctgggtc
ggcgaggactcggtcttcgctggcgccgcctcggggtactcgctcttctccaccggcggc
ggcgggacggggcagagcgtggacatattcgctctcccggagtcggccgggtcgcccagg
atcaggccgctgtccgggggcgaggaggtgatgctcctggtggacaatgtcggcgtggtt
gtcgaccggttcgggcacccttccggaagcagcttcgtgttcaacagcaggccggattgc
atcgccgaggtatttccgtacgtggtggtggccggggagtctaagttggacgtgtacagg
aggaggaacggggcgcacttgcagaccatcgcgatcgagagtagccgcgctggtgcgttg
accgtggcgagtgatgataaggtcgttgtggtcgctacggcttataaggttttctgctac
atcaaagtatctgcagtggaacagatcaaggcaccattgcgaagaaagagttatagggaa
gctatttctttgttggaagagtttgaatctgatggtgaaatctcgaaggatatgatctcc
tttgtccatgcacagcttggattcttactattctttgacttgcgttttgaggatgctgtt
aatcattttttgctgtcggagactatgcaaccagcagaaatatttccattcatcatgcgg
gatcctaatcgctggtcggatctggtgccaagaaagcgttattggggcttgcatcctcct
cctaagcctcttgaagaagttattgacgatggactggtaacacttcaacgggcattgttt
ctcaaaaaagcaggtgtggacacagttgtggatgaagatttcctttcaaatcctccaagt
agagctgatttattggaactagctatcagaaatattatcaggtacctgtgtgtagcacgt
gagaagaccttgtctcctgcagagatggaaggagttgatactcttctgatgtacctttat
agagcactcgatcttgttgatgacatggagaggcttgcatcatctcaaaatagctgtgtt
gtggaggaactagaatcactgttggaaaactctggacatcagcggacacttgctttctta
tatggtagtaagggaatgtgctcccaagctgttgctatctggcgtatcttagcaaggaat
tacagcacaggtttgtggaaggatcgtcctaatctgcctgaaacggactcccatgaagct
ttggctgaaaaaatgtctggtgagcaaattgctgctatcgaagcctccaagatacttcaa
gcaacatctgatcaggaccttgttctggaacatcttggatgggtagcagacattgatcag
gaccttgcaactgcaattttaacatctgagatgcgggaaaaacagctttctgctgaaaag
gttattgctgcccttgattcaggaaaggttgggattcaccaaagatatttgcagtggttg
atcgaggatcagggctgtgatgaccctcactaccacacatcatatgcactattgctgtca
aaatctgccatgcaagcatttcatgtggagtcaaattccagagagaaagatgatagagaa
attgactccgatgtacagttcattttttcgttgagagaaaggttgcaattatttttgcaa
tcttcagacttgtatgatccagaagaagtgcttgatgttatagaagaatctgaactttgg
ctggaaaaggcaatattatataggaaaatgggccaagagaacattgtacttcagatactg
gcactgaagctggaggatagcgaagctgctgagcagtactgtgcagagattggtcgagat
gatgcatatattcagcttttggatttgtatttggaccccaaaaatgggagagaaccaatg
ttcacagcagctgtccgacttctgcataatcacggaaaatctctggatcccatacaagta
ttggagagattatcctccgacatgcctcttcaactagcctcagatacaattttgcgaatg
ctcagagctcgggtgcaccatcatcgccaagggcagatagttcatagtttatcactcgcg
acaaaccttgatgcacggttgacaagattagaggagagatcaaggcatgtgcagctaact
gatgagagcatctgtgattcatgtcgagctcggcttggcacaaagctgtttgtcatgtac
ccagacgactcagttgtttgctacaggtgctaccgaaaccaaggtgattccgtttcacga
cgaggccgtaacttcaggaaagatgctatatttaaacagagctggcttgtcagtaggtag
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