Lolium perenne (perennial ryegrass): 127309032
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Entry
127309032 CDS
T08650
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127309032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127309032
03110 Chaperones and folding catalysts [BR:
lper03110
]
127309032
03029 Mitochondrial biogenesis [BR:
lper03029
]
127309032
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127309032
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127309032
Messenger RNA biogenesis [BR:
lper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127309032
Chaperones and folding catalysts [BR:
lper03110
]
Heat shock proteins
HSP60 / Chaperonin
127309032
Mitochondrial biogenesis [BR:
lper03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127309032
Exosome [BR:
lper04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127309032
Exosomal proteins of other body fluids (saliva and urine)
127309032
Exosomal proteins of breast cancer cells
127309032
Exosomal proteins of colorectal cancer cells
127309032
Exosomal proteins of bladder cancer cells
127309032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HhH-GPD
DUF7342
Motif
Other DBs
NCBI-GeneID:
127309032
NCBI-ProteinID:
XP_051195977
LinkDB
All DBs
Position
6:3032711..3037308
Genome browser
AA seq
598 aa
AA seq
DB search
MASPFGTTSTCGLNAAAPTGFAARTQLSLVSPPSVSFPQKIRPRRKCNVKVNAAKELYFN
KDGSAIRKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAKEVELEDPVE
NIGAKLVRQAAAKTNDLAGDGTTTSVILAQGMIAEGVKIVAAGANPVQIARGIEKTAKAL
VGELRKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLEEGKSAENNLY
VVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKINNARDLITILEDAIKSGYPIL
IIAEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEIGLS
LDKADAEVLGTAAKVVITKDSTTIVGDGTTQEEVTKRVTQIKNQIEASEQEYEKEKLNER
VAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDA
IKETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRFGYNAATGKY
EDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKEAEQAPAANPMAGSGYGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccattcgggaccacctctacatgtggcctcaacgccgccgcccccaccgga
ttcgcggccaggacgcagctctccttggtttcgcccccatctgtttcgtttccccagaaa
atcaggcccaggagaaagtgcaatgtcaaggtgaacgccgcaaaggagctctacttcaac
aaggatgggtccgccatcaggaagctgcaaaatggagtcaacaagcttgctgatctggtt
ggagttacccttggtccaaaagggcggaacgtcgtcctcgagagcaagtacgggtcgcct
aggattgtcaatgacggtgttacggtggcaaaggaggttgaacttgaagaccctgttgaa
aacattggagctaaactggttaggcaagctgctgctaagactaatgatctggctggtgac
gggacaaccacttccgtgatccttgctcaagggatgattgccgagggtgtcaagattgta
gctgctggtgctaatccagtacagattgctcgtggcattgagaaaacagccaaagcatta
gttggtgagctccgaaagatgtccaaggaggttgaagatagtgaacttgctgatgttgct
gctgtaagtgctggaaataactatgaaattggcaacatgatagctgaggctatgaacaag
gttgggcggcagggggtggtcacacttgaagagggaaagagtgctgaaaacaacctctat
gtcgtcgaagggatgcaatttgaccgtggctatatttctccctactttgtaactgacagt
gaaaaaatgtcagtagagtatgagaactgcaagctgcttcttgtggacaagaaaattaac
aacgctagagacctcattactattctggaggatgctattaagagtggatatccaattcta
ataatcgcagaggatattgagcaggaagctcttgcaacccttgtggtcaataggcttagg
ggtgcgttgaagatcgctgccataaaagcccctggttttggcgagcgcaagagtcaatac
ctggatgatattgctactctgacaggaggcactgtcatcagagaagaaattggactgtcc
cttgacaaagcagacgcagaagtcctaggaactgctgccaaggttgtaattaccaaagat
tcaacaacaatagttggagatggtactacacaggaggaagtaaccaaaagagtcacacaa
atcaagaaccagattgaggcttctgaacaggaatatgaaaaagaaaagctaaacgaaagg
gtagccaaattatctggcggtgttgccgtcatccaggtcggagcacagactgaaactgag
cttaaggaaaagaaactgagggttgaagacgcgctgaatgcgacgaaggcggctgtcgag
gaaggtatcgtggtcggtggtggctgtacccttttaaggcttgcatcaaaagttgacgcc
attaaagaaacccttgagaatgatgaacagaaggtcggtgctgagattgttaggaagtcc
ttgagttatccactaaaattaattgccaaaaacgctggtgttaatggcagcgtggtgact
gaaaaggtccttgccaatgacaacttcagatttggttacaacgctgcaaccgggaagtac
gaggatttgatggctgctggtattattgatcctaccaaggtggtgaggtgctgcctggag
cacgctgcatccgtggccaagactttcatcacctcggacgctgtcgtcgtcgacatcaag
gaggctgagcaggcacctgctgcgaacccaatggccggttcaggttatggcttctga
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