Lolium perenne (perennial ryegrass): 127311598
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Entry
127311598 CDS
T08650
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127311598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127311598
03036 Chromosome and associated proteins [BR:
lper03036
]
127311598
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127311598
Coactivators
SAGA/TFTC/STAGA complex
127311598
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127311598
STAGA complex
127311598
TFTC complex
127311598
SAGA complex
127311598
SLIK complex
127311598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
127311598
NCBI-ProteinID:
XP_051198001
LinkDB
All DBs
Position
7:312530518..312536337
Genome browser
AA seq
548 aa
AA seq
DB search
MSIVPKETIEVIAQSVGIPTLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD
VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENPPIDAISAPAENKRTEHVKDDGLPVDIKLPVKHILSRELQMYF
DKIAELTMSRSSTPVFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLADLPVLFALMRV
VQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVASVCRKYGH
AYHNLQIRLTKTLINAFLDPHKALTQHYGAVQGISALGTSAVRLLLLPNLQPYMQLLDPE
LQLEKQTNEMKRKEAWRVYGALLCAAGKCLYERLKLFPGLLSASTQPLLRSNKRVATNNP
NKRKSSTDLSASQPPLKKMASDVPMSSMFPAATMAGNMPGSVDSFSMQLPNPSMMQASSS
GQMADGIAAAGLIRRDQGGNHHAQMVSAVLRQAWKEDQDAGHLLASLHDVFGEAIFSFIQ
PPEISFFL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgttcccaaggagacgatcgaggtgatcgcgcagagcgtcggcatccccacc
ctccccgccgatgtctccgccgccctcgcccccgacgtcgagtaccgcctccgggagatc
atgcaggaggccatcaagtgtatgcggcatgcaaagaggacagttctgactgcagacgat
gttgacagtgctctcagcctcaggaatgttgagcctgtatacggatttgcttctggtgac
cccttgcggtttaaaagagctgtgggccataaggatctcttctatatcgatgacagggag
gtcgacttcaaagagattattgaagctcctctaccgaaagctcctctcgacacagcagtt
gtagcacactggctagctattgagggcgtccagcctgcaattccagagaatcctcctatc
gatgcaatttcagcaccagcggaaaataaaaggactgagcatgtgaaggatgatggacta
ccagttgacataaagcttcctgttaagcatatattatctagagaacttcagatgtacttc
gataaaatagcggagcttactatgagcagatcaagcaccccagtttttagagaagcatta
gtgagcttgtcaaaagactcgggccttcatccgctggtcccttacttttcgtacttcatt
gcagatgaggttaccaggagtttggctgaccttcctgttctatttgctctcatgcgtgtt
gtccaaagccttctccgcaatccacacattcatattgaaccatatttgcatcagttaatg
ccatcaatgatcacgtgcatcgttgcgaaaaggctagggcacaggctttctgacaaccat
tgggagcttagagacttctctgcgaatttggttgcttcagtatgtcggaaatatggccat
gcatatcacaatctccaaatccggttaacaaagacattgatcaatgcatttcttgatcct
cacaaagcattgacacaacattatggtgctgttcaagggatatctgcattggggactagt
gcggttagacttctgcttttgcccaaccttcagccgtacatgcaacttttggatccggaa
ttgcaacttgagaaacagacgaatgaaatgaaaagaaaggaagcatggcgggtttacggt
gccctgctgtgtgctgcaggcaaatgcttgtatgagcgtctcaagttatttcctggtttg
ctctctgcgtcaactcagccacttttgaggagtaataaaagagttgcaactaacaaccca
aataaacggaagtctagtacagatctctcggcatcccagccacctctaaagaagatggca
tccgatgtgccgatgagctccatgtttccagccgctacaatggcaggaaacatgccagga
agtgtcgacagtttctccatgcagctacccaaccccagcatgatgcaagcatcttcgtct
ggacaaatggcggatggcatagcagcagcaggcctgatccggagagaccagggaggtaac
caccacgcccagatggtgtccgcggtgctgaggcaggcctggaaggaggaccaagacgct
gggcatctcctggcatcgttgcacgatgtgttcggtgaagccatcttctcgttcatccag
ccgccagagatatccttcttcctctag
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