Lolium perenne (perennial ryegrass): 127312100
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Entry
127312100 CDS
T08650
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127312100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127312100
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127312100
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127312100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
127312100
NCBI-ProteinID:
XP_051198521
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All DBs
Position
7:complement(231061691..231062592)
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AA seq
287 aa
AA seq
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MFPPPPASFYGNVHPPPPSNDPVPVPPPHVPVLVHPVWGWSFHQEAARLRHFAEGARYVA
VNVHYPGLVHHPGKDQDALTDEKRYPILKANVDALKPLQVGIAVCDRDGKSEAWEFNLRD
FRRHSDPHDANSLAYLAGRGLDVDTFANHGIDAWSLGAMLLSYSGLIGPWRGLSWVTYTG
AYHVAYLLKIVTGGCPLPNDVAGFVGAVRHFLGDQVYDVAGMAADCPKLPVGLERIAAHL
GFHPPWNSPRLAAAAGVRALQVFRSLEDGELRDKVIRYRGLLQGLHH
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgccgcctccggcttctttctacggcaacgtgcatccgccgccgccttccaac
gaccccgtccccgtgccaccgccacacgtccccgtcctggtgcaccccgtgtggggctgg
agcttccaccaagaggccgccaggctccgccactttgccgagggcgcccggtacgtcgcc
gtcaacgtgcactacccgggcctcgtccaccatcccggcaaggaccaagacgccctcacc
gacgagaagcgctaccccatcctcaaggccaacgtggacgccctcaagccgctccaggtc
gggatcgccgtctgcgaccgcgacggcaagagcgaagcttgggagttcaacctccgggac
ttccgccgccactctgatccgcacgacgcgaactccctagcctacctcgccggtcgtggc
ctcgacgtggacacgttcgcgaaccacggcatcgacgcctggagcctcggcgccatgctg
ctgagttactccggcctcatcgggccctggcgcggcctgtcgtgggtcacctacaccggt
gcctaccacgtcgcctacctgctcaagatcgtcaccggcggctgcccgctaccgaacgac
gtggccgggttcgtcggcgccgtgcggcactttctcggcgaccaggtctacgacgtcgcc
gggatggcggccgactgcccgaagttgcccgttgggctggagcgcatcgccgcccacctc
ggcttccatccgccctggaacagccccaggctcgccgccgccgccggcgtacgcgcgctc
caggtgttcaggagcttggaggacggagagctccgagacaaggtcatcagatacagaggt
ctgcttcaaggcctgcatcactag
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