Lolium perenne (perennial ryegrass): 127312725
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Entry
127312725 CDS
T08650
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127312725
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
127312725
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
127312725
NCBI-ProteinID:
XP_051199231
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Position
7:complement(102409460..102411235)
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AA seq
407 aa
AA seq
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MATVLKVCFTLYLFAVVCGGHVHGVSNGASGGVYDVTEYGATPGSEDNKDAFVAAWRAAC
GSTAGNATLLVPAGTFAVGAVEFSGPCKNAPVFVIDGVLRPCTGGCHLSDDAWITFSALT
NLLVTGAGTLDGQGGVEKNKPKTTTLELDGVTNSTVRGLRFVDSRGFHVSVHRSSRVAAE
GLHIHAPAASHNTDGIHVGFSSHVRITDSVIGTGDDCVSVGPGSTDVVVTGVICGPGHGI
SVGSLGREEGEEEVRGLVVRNCTVRGTTNGLRIKTWPGSPPGLASNITFEDIAMADVANP
IVIDQSYCPHNRCGDDADKPSLVQISDVTFRRIEGTSSSKVAVQLRCSEERPCIGVRLDG
VNLRCGDDQPCRAQFANVRGAPALEAPAPGPWVPIDQDARPAPSDTE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgtcctcaaggtctgtttcacgctgtacctgttcgcagtggtttgcggtggc
cacgtacacggcgtcagcaatggcgcttccggcggcgtctacgacgtgacggagtacggg
gcgactccgggcagcgaagacaacaaagacgcgttcgtggcggcatggcgcgccgcgtgc
ggctccacggccggcaacgccacgctcctggtccccgcgggcacattcgccgtcggcgcc
gttgagttctcgggcccgtgcaagaacgcgcccgtcttcgtgatcgacggcgtgctccgg
ccgtgcactggaggatgccacttgtctgatgatgcctggatcacgttcagtgccctgacc
aacctcctggtcaccggcgccgggaccctcgacggccagggcggcgtcgagaaaaacaag
cccaagacgacgactctggagctggacggcgtgacgaactcgacggtgaggggcctgcgg
ttcgtggacagccgggggttccacgtgagcgtccaccgcagcagccgagtcgcggcggag
ggcctccacatccacgcgccggcggccagccacaacacggacggcatccacgtgggcttc
tcgagccatgtccgcatcaccgactcggtgatcggcaccggcgacgactgcgtgtccgtg
ggccccggctctaccgacgtggtggtgaccggcgtgatctgcggcccgggccatggcatc
agcgtggggagcctggggagggaggagggcgaggaggaggtgcgcgggctggtggtccgg
aactgcacggtgcgcggcaccaccaacgggctgcgcatcaagacgtggcccggctcgccg
cccggcctggcgtccaacatcaccttcgaggacatcgccatggccgacgtcgccaacccc
atcgtcatcgaccagagctactgcccccacaaccgctgcggcgacgacgccgacaagccg
tcgctggtgcagatcagcgacgtgacgttccggaggatcgaggggacgtcgagcagcaag
gtggcggtgcagctgcgctgcagcgaggagcggccgtgcattggggtgcgcctcgacggc
gtcaacctccggtgcggcgacgaccagccgtgccgcgcgcagttcgccaacgttcggggg
gcacccgccctggaggcgccggcgcccggcccgtgggttccgatcgaccaagacgctcgc
ccggcgccatcagacactgaatga
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