Lolium perenne (perennial ryegrass): 127312923
Help
Entry
127312923 CDS
T08650
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127312923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lper03036
]
127312923
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
127312923
SWR1 complex
127312923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
DBINO
Motif
Other DBs
NCBI-GeneID:
127312923
NCBI-ProteinID:
XP_051199418
LinkDB
All DBs
Position
7:327441306..327454922
Genome browser
AA seq
2161 aa
AA seq
DB search
MASKGPRSKLDHEARPKRKKAPEASKEPPKPKVHWDHVLGEMLWLSKEFEAERKWKLSMA
KKIAQKANLGVVDQATKDEKKQKEGEHRLRKVALNISKDVKKFWTKIEKLVLYKNHLEVE
EKKKKALDKQLDFLIGQTERYSTMLAENLVDVPHLQRLENGPLQTNLVSLEEVAEPSQAN
QPFQEEVAEPSHTNQPSQEEVAEPSQTNQPFQEEVAEPSQTNQPSQEEVAEPSQTNQPSQ
EEVTEENINAPTPDDLVTDKMETDDDYNSSSNEEQEDDERTIDEDEAQITEAERNEELAA
LQAEADLPLDDLLKMYTKAQVSRESSPTNKDTSSNSDLKNLIKDSSKQINGCNNHESGYS
SSDEGNDSEEANDRNCYTEFVKKNHGKTNGSFSSVEQEDKDYIGTDEGKDDEATLSEEEE
LAKKDDPDPLDEIKLLQKESEIPLEELLARYQKDGYADDETTDLENSPAYSSEDVNTHIM
LTMSPDGRSADNLELNNDTFENDETADMLVTEDVSGNALQLEEIVPEPSVQEEIVPEPGV
QEEIVPEPSVQEEIVAEPSVQEETVTAPSVHEEIVPEPSVHAEIVPEPSVQEEIVNVQEN
SVKEDELTDAKVMADKETGDSVMADAAAAARSAQPTGNTFSTTSVRTKFPFLLKHSLREY
QHIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLN
WETEFLKWCPAFKILTYFGSAKERKQKRQGWNKPNFFHVCITTYRLVIQDSKAFKRKKWK
YLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQ
EFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFLLRRLKRDVEKQLPQKIEHVIYCRL
SRRQRNLYEDFIANSETQATLTSGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGI
NMQISSSVCMVLDKGPFCQADLSDMNLVFTQNEFNMTSWEMDEVAALFSPGITSRGSGAE
ISCSYKDGQRSNGTNIFEEIQKALQEERMKEAKERAASIAWWNRVRCQKRPVYGTNIREV
LTIRHPICDVFEKKNNPSCHMDFSSSLADLVLSSVERFNKMLGFIESFTFAIPAARAAAP
ICWCKNRNSPVLLKPAYREQCMNEISPILSPIRPAIVRRQVYFPDRRLIQFDCGKLQELA
VLLRRLKSEGHRALIFTQMTKMLDTLEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNP
KFFLFILSTRSGGVGVNLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVNIYRLISE
STIEENILKKANQKRALDDLVIQRGGYNTEFFKKLDPMEFFSGHTSVNAEAQEMDHTRTA
VPSNETGLPLSNADVEAAIRQAEDEADYMALKKLEQEEAADNQEFSEEVAGRLEDDELVN
EEDGKPDEHTAEEHKHQSSDVDKDKSIALPMNQLDEEKALTLAVVDGDMDMLADVKQMAA
AAAAAGHASSSFENQLRPIDRYAMRFLELWDPVIDKAAVNYQVNVPEEEWELERIEKLKD
DLEAEIDEDQEPLSYETWDVDFATTAYHQHVEALAKKQLEEQEKQALEAAKELEETNEIV
SSHRKKSKKKRKAGKFKSLKKGRLSSDSEAMLDETSVDTMSIEDNAPSLELMSNESPHQC
SNKRKKMTPGNEEVNSGSRSLKRFKKAPKSNGVSESSSHKNSLEGKRLKLKDEVNDSDPK
LVRTKNDGRVSIPCMPVKRVMVIKPERLKKKGLLWPRDCALDPWTTEEDAVLCGTVNEYG
PVWELASEFIHSMPGGGLYRGRYRHPVHCCERFRELFCKHVLSATDNSNSEKAPSGAGKA
ILKVSEDQTRMLLNVISETPNNELLLQKHFMAILSSVWRSKCGHEPQRVTSTSSSATHKP
VILNENWPTTSNRPTFDLVRTALADAQAHCPRVVIPTSNPEPRRKSLELVLDFRTDQHAY
EAGFPSVVNVSILEPDPVKRAVVPVEQPLLSGHPHRHAEKRFRIAPESCFEGDGSHWASS
AFHIHDAARPKSGTKSTGKHKAASESGRPPKSKIQRTAEPHKAPSVMHDFLRAPGRASTS
AAEFHFTWSLSDFGIDDSEFTYIDDELPLEADIEFAPHQYDPGSLPGIEELDPHADLTDI
G
NT seq
6486 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaggtccacggtcgaagctggatcatgaggcaagacctaaacgcaaaaag
gctcctgaggcttcaaaggagcctccaaagccaaaggttcactgggatcatgttcttggg
gaaatgctttggctgtctaaggagtttgaagctgagagaaagtggaagttgtccatggct
aaaaagattgctcaaaaggccaatttgggtgtagttgaccaagcaacaaaggatgagaaa
aaacagaaggagggagaacatcgcctgagaaaggttgcactaaatatttctaaggatgtg
aagaagttctggaccaaaatagagaagctggttctctacaagaaccatctagaggttgag
gaaaagaagaaaaaggccctcgataagcagcttgattttcttataggtcaaactgaaaga
tattctactatgttggctgaaaacctcgtggatgttccccatttgcaaagactagaaaat
ggaccattgcagacaaatttagtatcccttgaggaagtagcagaaccttcacaggcaaat
cagccattccaggaggaagtagcagaaccttcacatacaaatcaaccatcccaggaggaa
gtagcagaaccttcacagacaaatcagccattccaggaggaagtagcagaaccttcacag
acaaatcaaccatcccaggaggaagtagcagaaccttcacagacgaatcaaccatcccag
gaggaagtaaccgaagagaacataaatgcgccaactcctgatgatcttgttacagataaa
atggaaaccgatgatgattacaatagctcctcgaatgaagagcaggaagatgatgagcgg
acaattgacgaggatgaagctcaaatcactgaggctgagcgcaatgaggaactagctgct
ttgcaggcagaagctgatctaccactggatgatcttctcaagatgtatactaaagcccaa
gttagcagggaaagcagtccaactaacaaagacacttccagtaactcagatttgaagaat
ttgattaaagattcttcaaaacaaataaatggctgtaataatcatgaatctggttatagt
tcaagtgatgaaggcaatgattctgaggaagctaatgatcgcaactgttacaccgagttt
gtgaagaagaatcatgggaaaaccaatggcagtttctcctctgttgagcaggaggacaaa
gattatattggtactgatgaaggaaaggatgacgaggcaactttatctgaagaggaagag
ttggcgaagaaagatgaccccgatcctttggacgagattaagttactgcagaaagagagc
gagatcccactagaagaacttcttgcaaggtaccaaaaggatggctatgcagatgacgaa
acaacagatttggagaattcacctgcatattctagcgaagatgttaacactcacatcatg
ttgacaatgtctccggatggtcgatctgctgacaatttggaactgaacaatgacacattt
gaaaatgatgagacagcagatatgctggtaactgaggatgtgagcggtaatgccctacag
ctagaagaaatagtaccagagcccagtgtacaggaagaaatagtgccagagcctggtgta
caggaagaaatagtgccagagcctagtgtacaagaagaaatagtggcagagcctagtgta
caagaagaaacagtgacagcgcctagtgtacatgaagaaatagtgccagagcctagtgta
cacgcagagatagtgccagagcctagtgtgcaagaagaaatagtaaatgtacaagaaaat
tctgttaaagaagatgagctgactgatgctaaggtgatggctgataaagaaactggtgac
agtgtaatggctgatgctgctgctgctgcaagatcggcacaaccaactgggaacaccttc
tcaacaacgagcgtacgcacaaaattcccattccttctcaagcattctcttcgggagtac
cagcatattgggttggactggttggttgctatgtatgaaaagaggctgaatggaattcta
gcagatgaaatgggtttggggaagacaatcatgactatctctttgctggcgcaccttgca
tgtgagaaggggatatggggtccacatcttattgttgtgccaaccagtgttatgttaaat
tgggagactgaatttctgaagtggtgccctgcctttaaaatactgacttattttggaagt
gcaaaggagagaaaacagaaacgtcagggttggaataaaccaaattttttccatgtatgc
atcacgacatacaggcttgttattcaggactctaaagctttcaagcgaaaaaagtggaag
tatcttatccttgatgaggctcatctgataaagaactggaaatcacaaagatggcagact
ctgctcaattttaattcaaaacggcgtattcttttgacaggaactcctttgcaaaatgac
cttatggaactttggtctctcatgcattttttgatgccacatgtattccagtctcaccaa
gagttcaaggattggttctgcaatccaatttcaggaatggtggagggccaggacaaggtt
aataaggaagttatagataggttgcacaatgtccttcgtccatttctattacgccgattg
aaaagagatgttgagaaacagttaccgcagaagattgagcatgtcatatattgtcgactt
tccagaaggcaaaggaacttgtatgaagattttattgccaactcagagacacaagcaaca
ctgacaagtgggaattatttcggtatgattagtatcattatgcaacttagaaaggtctgt
aaccatccagatcttttcgaaggccgtccaattatcagctcatttgacatggcaggaatt
aacatgcagatcagctcttcagtgtgcatggtccttgataaggggcctttttgtcaggcc
gacctctctgatatgaaccttgtatttactcaaaatgaatttaatatgacttcttgggaa
atggatgaggttgctgctctcttttctccaggcataacctctaggggctctggtgcagag
atttcctgctcttataaggatggtcagagaagtaatggaacaaatatttttgaagaaatt
cagaaagccttgcaggaggagagaatgaaagaagccaaagaaagagcagcttcaattgca
tggtggaatagagtaagatgccagaaaaggcctgtttatggtacaaacattagggaggtt
ctgaccataagacatcctatctgtgatgtttttgagaagaagaataacccttcgtgccac
atggatttttcatcgagtctagcagatcttgttctttcatcagtggaacgattcaataaa
atgcttggctttattgaatcatttacttttgcaattcctgctgcacgggctgctgctcct
atttgctggtgcaaaaataggaattctcctgttcttcttaaaccagcatacagagaacaa
tgcatgaatgagatctcgcccattctctctcctataagacctgcaatcgttcgccgtcaa
gtttactttcctgacaggcgcttgatccagtttgactgtgggaagttgcaggagcttgct
gtcttgctgagacgtttgaagtcagaggggcacagggccttgatatttacacagatgact
aagatgcttgatactttggaggaattcattaatttgtatgggtacacatatttgcggtta
gatggctctacccagccagaagagagacaaacactaatgcagaggtttaatacaaaccca
aagttttttctcttcattttatccactcgtagtggtggtgtgggagttaacctagtaggc
gcagacactgttatattctatgatagtgattggaaccctgcaatggatcaacaagcccaa
gacagatgtcacaggataggacaaacacgtgaagttaacatctatagactaattagtgag
agcactatagaggagaacattctcaagaaagcaaatcagaagcgagcacttgatgattta
gtaattcagcgtggtggttacaatacagagttcttcaagaaactagaccctatggagttc
ttttctgggcacacatctgtcaatgctgaagctcaggagatggatcacactaggactgct
gtaccctcaaatgaaactggtctgcctctgtcgaacgcagatgttgaagcagctattaga
caggcagaagatgaggctgactatatggctcttaaaaaactggagcaggaagaggctgca
gacaatcaagaattcagtgaggaggttgctggacggctagaggatgatgagcttgtaaat
gaggaggatgggaaacctgatgagcacactgctgaagagcataaacatcaatcttccgat
gtggataaggacaaaagtattgctttacccatgaaccagttagatgaagaaaaggctctt
acactggctgtggttgacggagatatggacatgcttgctgacgttaagcagatggctgct
gcagctgctgcagcaggacacgcgagttcatcttttgaaaatcagctccggccaatcgat
agatatgcaatgcggtttttggagctctgggatccagtgattgacaaagctgctgtaaac
tatcaggtgaatgttccagaggaagaatgggaacttgaacgcattgaaaaactcaaagat
gatttagaagcagaaattgatgaagaccaggaacctctatcttacgagacatgggatgtt
gattttgctactacagcgtatcaccaacatgttgaggctctagctaaaaagcagttggaa
gaacaggaaaaacaagctcttgaagcagcgaaagagttggaggagaccaatgaaatagtc
agcagtcaccgcaaaaagtcgaagaagaaaaggaaggcaggcaagtttaagtccttaaaa
aaggggcgtttgtcatcagattcagaggccatgcttgatgaaacgtctgtagatactatg
agtattgaagacaatgcaccttcgctggagcttatgagcaatgaatcaccgcaccaatgt
tctaataagcgtaaaaagatgacgcctggaaatgaggaagtgaacagtggtagcagaagc
ctgaagaggtttaagaaagcccccaaatcgaacggtgtttcggagtcctcatcacataaa
aactcactcgaaggcaagcggctgaagctgaaggatgaagttaatgattctgatccaaag
ttggtgagaactaagaatgatggtcgggtttccatcccttgcatgccagtaaaacgtgtt
atggtaattaagcctgagaggttgaagaagaagggtcttctatggcctcgggattgtgca
ttagatccatggactactgaagaagatgcagttctttgtggaactgtaaatgagtatggt
cctgtttgggaactggctagtgaatttattcactccatgccaggtggtggactttacagg
ggaaggtatcgtcatcctgtgcattgctgtgagagattccgagaattgttctgcaaacac
gtattgtcagcaactgacaattcaaacagcgagaaggctccttctggtgccgggaaggct
atcttgaaagtatcggaggatcaaactcggatgttgctgaatgtgattagtgaaactcct
aacaatgagttgcttctccagaaacatttcatggccatactttcttctgtttggagatca
aaatgtggtcatgagccccaacgtgttacaagtactagctctagtgcaacccataagcct
gttatactgaacgagaactggcccacgacaagtaacaggccaacctttgatcttgtaagg
acagctctcgcagatgctcaggcccattgtccaagggtggtaataccaacaagcaatccg
gagcctcgcaggaaaagtttagaattggtgttggatttccggacagatcaacatgcttac
gaagcaggcttcccgtctgttgtgaacgtgtccattctagaaccagatcctgttaagcgc
gccgttgtgcctgtggaacaaccgctgctttctggacatcctcatagacacgctgagaaa
agattcaggatagcaccagaatcttgttttgaaggggacggttctcactgggcatcatct
gctttccacatacatgatgctgctcggcccaaatctggcacgaagtccactgggaagcac
aaggcagcttcagaatcaggaagacctccaaaatcgaagatccagaggactgctgaaccg
cacaaagcgccgtctgttatgcatgacttcctccgggccccaggtcgagcttcgacaagt
gcagctgagttccacttcacgtggtccctgtctgactttggcatcgacgattccgagttc
acctacatcgatgacgagcttcctctagaggctgacatcgagttcgccccgcaccagtat
gaccctggctcacttcctggcatcgaggagttggatcctcatgcagatttgacagacata
gggtga
DBGET
integrated database retrieval system
