Lolium perenne (perennial ryegrass): 127313014
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Entry
127313014 CDS
T08650
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127313014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127313014
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127313014
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GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
LRR_Zer-1
F-box-like
LRR_At1g61320_AtMIF1
Colipase-like
Motif
Other DBs
NCBI-GeneID:
127313014
NCBI-ProteinID:
XP_051199512
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Position
1:complement(173492728..173497016)
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AA seq
377 aa
AA seq
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MVSARSLDGELDSCFRNLTVSRGCGRGQPETGGDMPTLSGWKDLPMELLMRIISVAGDDR
IVVVASGVCTGWRDTLGWGVTNLSLSWCQQNMNNLTISFAHKFTKLQVLTLRQIKPQLED
SAVEAVANYCYDLRELDLSRSFRLSDRSLYALANGCPRLTKLNISGCSSFSDSALIYLSC
HCKNLKCLNLCGCVKAATDESLQAIARNCAHMQSLNLGWCDNVTDEGVTSLASGCPDLRA
LDLCGCVLITDESVIALASGCPHLRSLGMYYCQNITDRAMYSLANSCVKSKRGRWGAVRS
SSSKDIDGLANLNISQCTALTPPAVQAVCDSFPSLHTCPERHSLIISGCLSLTSVHCACG
LQRHRAEGTLQPTSHAY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggttagtgcgaggtcactagacggggagttggattcgtgcttcaggaacctcacggtg
tctcgtggctgtggaagggggcagcctgaaactggtggcgatatgcctacgttgtcaggt
tggaaggaccttccaatggagctgctcatgcggattatatcagttgctggagacgatcga
atcgtcgttgtggcatccggtgtttgcactgggtggcgcgacacattagggtggggggtc
actaatctttccctttcatggtgccagcagaacatgaataatttaacaatatcatttgct
cacaagttcacaaagcttcaggttctcactcttcgccaaatcaaacctcagcttgaagac
agtgcagtagaggctgttgccaactactgttacgatctacgtgagttagacctcagcaga
agtttcaggcttagtgaccgctcactgtatgcactggccaacggatgtcctcggcttacg
aaactaaacatcagtggatgttccagtttcagtgacagtgccttaatctaccttagttgc
cactgcaaaaacctgaagtgcttgaatctgtgtggatgtgtgaaggcagccactgatgaa
tctttgcaggccatagcccgtaactgcgcgcacatgcaatctttaaacctaggatggtgt
gacaatgtcacagatgagggggttaccagtttggcatcaggttgccctgatctgagggcc
ctagatttgtgtggttgtgttcttataacagacgagagtgttattgctcttgcaagtggg
tgccctcaccttcgatccttgggcatgtactactgccagaacatcaccgatcgtgccatg
tactccctcgcaaacagctgtgtgaagagcaaacgagggaggtggggtgcagtgaggagc
agcagctcaaaggacatcgacgggctggcaaacctcaatatcagccaatgcacggcattg
acacctccagctgttcaggcggtctgcgactccttcccgtcactccacacctgtcctgag
aggcactccctcatcatcagcggctgcctcagcctgacatctgttcactgtgcctgtggc
ctccagcggcaccgtgctgaaggcaccctgcagcccacgagccatgcgtactga
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