Lolium perenne (perennial ryegrass): 127313836
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Entry
127313836 CDS
T08650
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127313836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127313836
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127313836
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127313836
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-RING_UBOX
DUF7567
zf-Di19
Motif
Other DBs
NCBI-GeneID:
127313836
NCBI-ProteinID:
XP_051200260
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All DBs
Position
7:227774561..227778749
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AA seq
338 aa
AA seq
DB search
MDMIQSIECVSSSDGMEDDDAMSSNLPLPLPRPFLKASAAAAIAAASIGVVPTSGAGAAP
GPLIPPATSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRC
LALEKVAESLELPCRYYTLGCPEIFPYYSKLKHESQCNFRPYSCPYAGSECSSVGDIPFL
VSHLRDDHKVDMHSGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAP
VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM
ALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatccagagcatcgagtgcgtgtcgtcgtcggacggcatggaggacgacgac
gccatgtcctccaacctgcccctgcccctgccccgccccttcctcaaggcctccgcggcc
gcggccatcgcggccgccagcatcggggtggtccccacgtccggcgccggcgcggcccca
ggcccgctgatcccgccggcgaccagcgtccacgagctcctcgagtgccccgtctgcacc
aactccatgtatcccccgatccaccagtgccaaaatggtcataccctttgttcgacctgc
aaagctcgggtgcacaaccgctgccctacctgtcgacaagagctgggtgatatcaggtgt
ttggcactggaaaaggtcgctgaatctcttgagctaccctgcagatactacacactaggc
tgtccagagatcttcccatactatagcaagctcaagcatgagtcgcagtgcaattttagg
ccatacagctgcccttatgcaggatctgaatgctcctcagttggagacattcctttcctt
gtttcacatctgagagatgaccataaggttgacatgcattctgggtcgacattcaaccat
cgctatgtcaagtcaaatcccagagaagttgaaaatgcaacctggatgctaactgttttc
cattgtttcgggcagtatttctgcttgcattttgaggccttccagctcggaatggcacca
gtctacatggcatttctccgcttcatgggcgatgagaacgatgcgaggaactacagctat
agccttgaggtgggtgcgaatggcaggaagatgatatgggagggcacgccccggagcatc
cgggacagccaccgcaaagtgcgcgacagccacgatggcctcataatccagcgcaacatg
gcgctcttcttctccggcggggagaggaaagagctgaagctgcgggtgacaggtcgcatc
tggaaggagcagcagaatcctgactcaggagcctgcatccctaacctcttcagctga
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