Lolium perenne (perennial ryegrass): 127314129
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Entry
127314129 CDS
T08650
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lper03009
]
127314129
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
127314129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4
AAA_21
Fer4_RLI
Fer4_21
Fer4_6
AAA
AAA_15
AAA_22
SRP54
AAA_23
VapE-like_dom
NACHT
AAA_7
AAA_29
Fer4_2
DUF5906
nSTAND3
RsgA_GTPase
AAA_16
TsaE
Fer4_9
Rad17
Fer4_7
Fer4_10
RNA_helicase
Fer4_3
ORC-CDC6-like
Fer4_4
AAA_24
AAA_19
Fer4_16
DUF3887
Fer4_17
Fer4_8
Motif
Other DBs
NCBI-GeneID:
127314129
NCBI-ProteinID:
XP_051200554
LinkDB
All DBs
Position
1:complement(177846819..177854076)
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AA seq
604 aa
AA seq
DB search
MSGRSSRIAVVAEDRCRPSKCGQQCRKRCPVNATGRHCIEVTPSSKVSLISEDLCIGCAI
CVKVCPFNAIQIINLPSSLEKETTHRYGPNSFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
QILAGIFKPNLGKFTVTPSADEILRYFRGSQLQKYFTRLMEDKMKATIKPQYIDNIRKSV
KGKVGDYLSKEDQRQVKDTLCDVLELNQILDRDVSDLSGGELQRFAIAARAMKEADVYIF
DEPSCYLDVKQRLKAAQVIRSLLQPKNYIIVVEHDLSILDYLSDYICCLYGTPGAYGVVT
LPSSVRDGINHFLNGFIPTENLRFREEKLTFRVTESTELIIEGQTYQYYKYPPMVKTVRG
FKLSVTEGSFNDSQIIVMLGENGTGKTTFIRMLAGEVKPDKVSDEQVGMPAYTVSYKRQE
LVSKYSSTVRDLLEEKIPGSFTQAQFKSDVMKPLKIEELMDRQVENLSGGELQRVKLCVC
LGKPADIYLIDEPSAHLDSEQRLLAAKVIKRFILHQKKTAFIVEHDFIMAAYLADKVLVF
EGKPSVDCTANAPESLASGMNRFLSHLDVTFRTDPTTYRPRINKLGSMKDTEQKAAGCYY
YLEY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcggtcgagccggatcgcggtggtggcggaggaccgatgccggcccagcaag
tgcggccagcagtgccgcaagcgctgccccgtcaacgccaccgggcgccactgcatagaa
gttactccatcatctaaagtctctctaatttcagaggatctatgcattgggtgcgccatt
tgtgtaaaggtatgcccgtttaatgctatccaaattattaacttgccaagtagtcttgaa
aaggagacgacacatcgctatggaccaaattccttcaagcttcacaggcttcctgttcca
agacctgggcaagttttgggcttagtagggacaaatggtattgggaaatcaactgcactt
caaatattggctgggatttttaaacccaacttgggtaaattcacagtcaccccaagtgcg
gatgaaattttgaggtatttccgtggatcccaacttcagaaatacttcactcgtctaatg
gaagacaaaatgaaggcaactattaaacctcagtatattgataatattcgaaaatctgtt
aaagggaaggttggggactatcttagtaaggaagaccagagacaagtgaaggatacatta
tgtgatgttcttgaattgaatcaaattctggacagagatgtctcagatctatccggcggt
gagcttcagagatttgcaattgctgctcgtgctatgaaggaagcagatgtttatatattt
gatgagccatcctgctatcttgatgtcaaacaaaggctgaaagctgcacaagttattcgt
tccttgctacaacccaaaaactatataattgttgtggagcatgatcttagcattcttgac
tacttatcagactacatatgttgtctttatggaactccaggagcatatggtgttgttact
ttaccctcttcagtcagagacggaattaaccatttcctaaatggctttatcccaacagaa
aatttacgtttccgtgaggagaaacttacatttagagtcaccgagtctacggagctgatc
atagagggacagacttaccaatactataagtatcctcccatggtgaaaacagttcgtggt
ttcaagctctcagtaacggaaggcagctttaatgattcccagataattgtcatgcttggt
gagaatggtaccgggaagacaacatttattcgtatgctggcaggggaagtgaaaccagac
aaagttagtgatgagcaagttggtatgcctgcatatactgtctcatacaagcgtcaggaa
ttggtctctaaatatagctctacagtgagggaccttctagaggagaaaatacctggatca
ttcacacaagctcagttcaaatccgatgtcatgaaaccactgaaaattgaggaactcatg
gacaggcaggttgaaaatctttctggtggagagctgcaaagggtcaaactctgtgtttgt
ctcggaaagcctgctgatatttacctcatagatgaaccaagtgctcaccttgattcagaa
caacgccttcttgcagcaaaggtgataaaaaggtttatccttcaccaaaagaaaacggct
ttcatcgtcgagcatgatttcattatggcagcctaccttgctgacaaggtactcgtattt
gagggaaaaccttcagttgattgtactgcaaatgcaccggaatccctggcttctggaatg
aaccgttttctgtcacatcttgatgtcacgtttaggacggatccgacaacctacaggcca
cggattaacaagctgggttcgatgaaggacactgagcagaaagctgcgggatgctattac
taccttgagtattaa
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