Lolium perenne (perennial ryegrass): 127314675
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Entry
127314675 CDS
T08650
Name
(RefSeq) homeobox-leucine zipper protein ROC1
KO
K09338
homeobox-leucine zipper protein
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127314675
Transcription factors [BR:
lper03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
127314675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
127314675
NCBI-ProteinID:
XP_051201142
LinkDB
All DBs
Position
7:192021704..192026480
Genome browser
AA seq
803 aa
AA seq
DB search
MTPARRLPPMIGRSSVAYGSAAALGLTQADLLDSHHLHQALIQQQLFEQIPATMTTAAAV
DSGSADHMLHSRGTSDALLAPDELESKSCSENVDGGGGGGGSGEEDDEQDPNQRPRKKKR
YHRHTQHQIQELEAFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKNQHEKHE
NSQLRADNDKLRAENMRYKEALSSASCPSCGGPAALGEMSFDEHHLRVDNARLRDEIDRI
SGIAAKHVGKPMVSSPFLPAGMLSGSLAAVAARSPLDLVGAYGGGGDMFGGDMLRSVSRG
GGQIIDVDKPMIIELAVAAMDELIQMARLDDPLWSARPGDGIPVAAEVLDEEEYGRVFPR
GLGPRQYGLKPEASRGCAVVIMTHGSLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAG
NYDGALQVMSMEFQVPSPLVPTRESYFVRYCKHNPDGSWAVVDVSLDSLRQSPVVKCRRR
PSGCIIQELPNGYSKVTWVEHVEVDDRSVHNIYKPLVNSGLAFGARRWVGTLSRQCERLA
SAMASNVPNGDLGVITSVEGRKSMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRV
MTRKSVDDPGRPPGIVLNAATSFWLPVTPSTVFDFLRDETSRSEWDILSNGGVVQEMAHI
ANGRDHGNCVSLLRVNSANSNQSNMLILQESCTDASGSYVVYAPVDIVAMNVVLNGGDPD
YVALLPSGFAILPDGPPPSATQGPENSTGGGGSLLTVAFQILVDSVPTAKLSLGSVATVN
SLIACTVERIKAAVCRDTASNPQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggccagacgcctgccgccgatgatcggccgaagcagcgtggcgtatgggtcg
gcagccgcactgggtctgactcaggctgacttgctggacagccaccatctgcatcaagca
ctaatccagcagcaactcttcgagcagatcccggcaaccatgacgacggcggcagcggtg
gacagcggcagcgccgaccacatgcttcatagccggggcacctccgatgcgctgctggcg
cctgacgagctcgagagcaagtcgtgcagcgagaacgtcgacggtggtggtggtggcggc
ggctctggcgaggaggacgacgagcaggatcccaaccagcgtccccgcaagaagaagcgg
taccaccgccacacacaacaccagatccaagagctcgaagcgttctttaaggagtgccct
catccggacgacaagcaacggaaggagctgagccgggagctgagcctggagccgttgcag
gtcaagttctggttccagaacaagcgcacacagatgaagaaccaacacgagaagcacgag
aactcgcagctgcgcgccgacaacgacaagctccgcgcggagaatatgcggtacaaggag
gcactgagcagcgcgtcctgccccagctgcggcgggccggccgcgctaggcgagatgtcc
ttcgacgagcaccacctccgcgtcgacaacgcccgcctccgcgacgagatcgacaggata
tctggcatcgcggccaagcacgtcgggaagcctatggtgtcatccccctttctcccggcg
gggatgctctccggctcactcgcggccgtcgctgcgcgatccccgctcgacctagtcgga
gcctacggcggcggcggggacatgttcgggggcgacatgctgaggagcgtgtcccgaggc
ggtggccagatcatcgacgtcgacaagcccatgatcatcgagctggccgtagccgccatg
gacgagctcatccagatggcgcggctcgacgacccgctctggagcgcacgcccgggcgac
ggcatcccggttgcggccgaggtgctggacgaggaggagtacggccgcgtgttcccgagg
gggctcggtccaaggcagtacggactcaagccggaagcttcccgtggctgcgccgtcgtg
atcatgacccatggcagcctcgtcgagatcctcatggacgtgaatcaattcgcgacggtg
ttctcgagcatcgtgtcccgagcttctacgcacgaggtgctgtccaccggcgtggcaggg
aactacgacggtgcattgcaagtgatgtcaatggagttccaagtgccgtcgccattggtg
ccaacgcgggagagctacttcgtgaggtactgcaagcacaatcccgacgggtcgtgggcc
gtggtcgacgtctccctggacagcctgcgccagagcccagtcgtgaaatgccggcgcagg
ccttccggctgcattatccaagaattgcccaacggctactcaaaggtgacatgggtagag
catgtggaagtggacgacaggtcggtgcacaacatctacaagcctctggtgaactccggc
ttggcgttcggcgcgaggcggtgggtcggcacgctgagccggcagtgcgagcgcctcgcc
agcgccatggccagcaacgtccccaacggcgatctcggcgtgatcacaagcgtggagggg
cggaagagcatgctaaagctggcggagcggatggtggcgagcttctgcggcggcgtgacg
gcgtccgtggcgcaccagtggacaaccctgtcaggcagtggcgccgaggacgtgcgcgtc
atgaccaggaagagcgtcgacgaccctgggaggccgccggggatcgtgctcaacgccgcc
acctcattttggctccccgtcacgcccagcaccgtcttcgacttcctccgcgacgagacg
tcacgcagcgagtgggacattctgtccaacggcggcgtcgtccaggaaatggctcacatc
gccaacggccgcgaccacggcaactgcgtctccctccttcgtgtcaacagcgccaactcg
aaccagagcaacatgctgatcctgcaggagagctgcacggatgcgtcggggtcctacgtc
gtgtacgcgccggtggacattgtggccatgaacgtggtactcaacggcggcgacccggac
tacgtggcgctcctgccgtcgggcttcgccatcctgcccgacgggccgccgccgtcagca
acccaggggcctgaaaactcgacggggggcgggggctccctcctgacggtggcgttccag
atactggtggactccgtcccgacggcgaagctctcgctgggctccgtcgccaccgtgaat
agcctcatcgcctgcaccgtggagcgcatcaaggccgccgtctgcagggacacggccagc
aatccgcagtag
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