Lolium perenne (perennial ryegrass): 127314771
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Entry
127314771 CDS
T08650
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127314771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127314771
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127314771
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
127314771
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127314771
NCBI-ProteinID:
XP_051201255
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Position
7:complement(176907959..176912888)
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AA seq
286 aa
AA seq
DB search
MVGLSEGEKHFIRGGIAQDLRADGRTRLQFRAVTVETGIIPQANGSARVRMGATEVIASV
KAELGKPTILHPGKGKVSIYVDCSPTAAPMFEGRGSEELSAELSVALQRCLLGGKSGAGA
AIDLSSLIVIEGKACWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKVNVSLNAETD
GEPEFDISDEDFLQFDTSSVPVIVTLTKVGKHYIVDATSEEESQMSSAVSVSVNRLGQIC
GMTKRGGAGLDPSVIFDMISVAKHVSQRFISLLDSEIAAAEAADAE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctctcggagggggagaagcacttcatccgcggcggcatcgcgcaggacctc
cgggcagacggccgcacgcggctgcagttccgggccgtcaccgtcgagaccggaatcatc
ccccaggcgaacggctcggcgcgtgttaggatgggtgcgaccgaagtcatcgccagcgtc
aaggctgagttggggaaacccacaattcttcaccctggcaaaggaaaagtttccatttat
gttgattgcagtccaactgctgcgcctatgtttgagggtagaggttctgaagaattgtcg
gctgaactctctgttgcgctgcaaagatgtttactgggtggtaaaagtggggcaggggct
gcaattgatttgtcgtccctaatcgtcattgagggaaaagcttgctgggatctgtacatt
gatggacttgtcgtcagttctgatggtaatttgcttgatgcactagctgctgcgataaag
gttgctttgagtgatacaggtattccaaaagttaatgtttccctgaatgctgaaacggat
ggggagcctgagtttgatatcagtgatgaagattttttgcaattcgacacttccagtgtg
cctgttatagttacattgaccaaggttggtaagcactatattgtcgatgccacttcggag
gaggaatcccagatgagttctgcggtttcagtttcagtcaacaggcttggccaaatatgt
gggatgaccaagaggggaggcgcagggttggatccaagcgttattttcgatatgatatct
gtggccaagcatgtaagccaacggttcatctctctactggactcggagatcgcagctgct
gaagctgcagatgctgagtaa
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