Lolium perenne (perennial ryegrass): 127315799
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Entry
127315799 CDS
T08650
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lper01009
]
127315799
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127315799
Enzymes [BR:
lper01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127315799
Protein phosphatases and associated proteins [BR:
lper01009
]
HAD phosphatases
Fcp/Scp phosphatases
127315799
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127315799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
127315799
NCBI-ProteinID:
XP_051202212
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All DBs
Position
1:complement(186348019..186352753)
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AA seq
490 aa
AA seq
DB search
MSLAAESPSPSLSSPSDEDDDFADLLAAELELELSSVADSAPHADPSASPASDHDEEGED
DVVVEVDAVEQGSSKRRRVGEQHQDRTTAMMLDEDATGSFKDDQVKICPPHPGFFGGLCF
RCGKSQDEEDGSGVAFGYVHKGLRLGTSEMDRLRGSEVKNLLRDRKLVLILDLDHTLINS
TRLHDISATEMDLGIQTAASKDLPNKSLFNLQGMYMLTKLRPFVRKFLEEASSMFEMYIY
TMGDKAYAIEIAKLLDPGNVYFGSKVISNSDCTQRHQKGLDVVLGAESTAVILDDTEYVW
QKHKENLILMERYHYFAASLRQFGFTDRSLSELMQDERESDGALATILDVLKRIHTIFFD
SGVETALSSRDVRQVIKRVRQEVLQGCKLVFTRVFRSDCRAQDQIIWKMAEQLGAVCCSE
VDSTVTHVVALHSGTDKARWAVKNKKFLLHPRWIEACNYRWQRLPEEGFPVPKSKEKGKE
KVTEDAQTDS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgccgccgagtcgccgtcgccgtccctctcttccccgagcgacgaagacgac
gacttcgctgaccttctagccgcggagctcgagctcgagctctcctccgtcgcggactcc
gccccccatgccgacccctccgcgtcacccgccagcgaccacgacgaagagggggaggac
gacgtggtggtcgaagtagacgccgtggagcagggcagtagcaaaaggcgtagagtgggg
gaacagcaccaagatcgaacaacagcaatgatgcttgatgaagatgccactggttcattt
aaagatgatcaagtaaagatatgtcctccacatcctggattttttggtgggctttgcttt
agatgtgggaaaagccaagatgaggaagatggttcaggagttgcttttggttacgtccac
aagggtttgaggctaggtacttcagaaatggacaggctacgtgggtctgaagtgaagaat
ttgttgcgtgacagaaaactggtgcttattttagacttagatcatacactgattaattca
accaggctccatgatatttctgctactgagatggacctggggattcagactgctgcatca
aaagatcttccgaacaaaagcttgttcaatttacagggaatgtatatgcttacaaagtta
agaccctttgtacgtaaatttttagaagaagcaagcagtatgtttgagatgtatatatac
accatgggtgacaaggcttatgcaattgaaatagcaaagcttcttgaccctggtaatgtc
tattttggttcaaaagtgatttcaaactctgactgcactcagcggcaccagaaaggcctt
gacgtggttcttggagctgaaagcactgcagtgattcttgatgacactgagtacgtctgg
cagaagcataaagaaaacctgattctgatggagagatatcattattttgctgcgagcttg
cgccagtttggttttaccgacagatctttgtcagagttgatgcaggatgaaagggagagt
gacggtgctttggctacgattttagatgtcctgaagcgcatacacacaattttctttgac
tcgggtgttgaaactgctctttcttcgcgagacgtaagacaggtaatcaagcgggtgcgt
caggaagtgctgcagggctgcaaactagtcttcactcgagtgttccgatcggattgccgg
gcacaggatcagataatctggaagatggccgagcagctgggcgccgtttgctgctctgaa
gtggattccactgtcactcatgtggtcgccctgcactccgggacagacaaggctcgctgg
gctgtcaagaacaagaagttcctgctccacccccgctggatcgaggcctgcaactaccgg
tggcaacggctgccggaggaaggtttcccggtacctaaatccaaggagaagggcaaggag
aaggttacggaggatgctcagactgactcgtag
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