Lolium perenne (perennial ryegrass): 127315808
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Entry
127315808 CDS
T08650
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lper01009
]
127315808
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127315808
Enzymes [BR:
lper01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127315808
Protein phosphatases and associated proteins [BR:
lper01009
]
HAD phosphatases
Fcp/Scp phosphatases
127315808
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127315808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
DUF7162
HAD
DUF5512
BRCT_2
EAP30
Motif
Other DBs
NCBI-GeneID:
127315808
NCBI-ProteinID:
XP_051202222
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All DBs
Position
1:complement(186329328..186334673)
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AA seq
488 aa
AA seq
DB search
MSLVAESPPPSLSSLSDDDHFADLLAAELELELSSAPHGDPSESPTGHDDGEEEEDVVVE
VDAVEQGSSKRCRVEEQHKDRRTAVMPDEDAIGSFKDAQIKFCPPHPGYCFGLCTKCGKI
QDEEDVSGVHFGYIHKSLSLGTSEMDRLRGAEVKNLLRKRKLGLISDLDHTLINSTRLHD
ISAAEMDMGILTAASKNADVPNKSLFNLQGMHMLTKLRPFVRKFLEEASNMFEMYIYTMG
DQAYAVEIAKLLDPGNVYFGSKVISKSDCTERHQKGLDVVLGDESTAVILDDTGNVWQKH
KENLILMERYHYFAVSPRHFGFSDRPLSELMQDERESDGALATILDVLKRIHAIFFESGV
ETALSSRDVRQVIKRLRQEVLQGCKLVFTRVFRSDCRPQDQIIWKMAEQLGAVCCSEVDS
TVTHVVALHAGTDKARWAVKNKKFLLQPRWIEACNYRWHRQPEEGFPVPSSKEKGKEKVA
EDAVAAAD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgttgccgagtcaccgccgccgtccctgtcttccctgagcgacgacgaccat
ttcgccgaccttctagccgcggagctcgagctcgagctctcctccgccccccatggcgac
ccgtccgagtcacccaccggccacgacgacggagaggaggaggaggacgtggtggtcgaa
gtggacgccgtagagcagggcagtagcaaaaggtgtagagtggaggaacaacacaaagat
cgaagaacagcagtgatgcctgatgaagatgccattggttcatttaaagatgctcaaatc
aagttctgtcccccacatcctgggtattgttttggactttgcactaaatgtgggaaaatc
caagatgaagaagatgtttcaggagttcattttggttacatccacaagagtttgagtcta
ggtacttcagaaatggacaggctacgcggggctgaagtgaagaatttgttgcgtaaaaga
aaactggggcttatttcagacttggatcatactctgataaactcaaccagactccatgat
atttccgctgctgagatggacatggggattctaactgctgcatcaaaaaatgcagatgtc
ccgaacaaaagcttgttcaatttacagggaatgcatatgcttacaaagttgagacccttc
gtccgtaaatttttagaagaagcaagcaatatgtttgagatgtatatatacaccatgggt
gaccaggcttatgcagttgaaatagcaaagcttcttgaccctggtaatgtctattttggt
tcaaaagtgatttcaaaatctgactgcactgagcggcaccagaaaggtcttgatgtggta
cttggagatgaaagcactgcagtgattcttgatgacactgggaatgtttggcagaagcac
aaagaaaacctgattctgatggagagatatcattattttgctgtgagcccgcgccacttt
ggttttagcgacagacctttgtcagagttgatgcaagatgaaagggagagcgatggtgct
ttggctacgattttagatgtcctgaagcggatacatgcaattttctttgaatcgggtgtt
gaaactgctctttcttcgcgagacgtaagacaggtaatcaagagattgcggcaggaagtg
ctgcagggctgcaaactagtcttcactcgagtgttccggtcggattgccggccgcaggat
cagataatctggaagatggccgagcagctgggtgccgtttgctgctccgaagtggattcc
actgtcacgcatgtggtcgctttgcacgctgggacagataaggcccgctgggctgtcaag
aacaagaagttcctgctccaaccccgctggatcgaggcctgcaactatcggtggcaccgg
cagccggaggaaggcttccccgtacctagctccaaggagaagggcaaggaaaaggttgcg
gaggatgccgttgccgctgctgattaa
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