Lolium perenne (perennial ryegrass): 127316817
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Entry
127316817 CDS
T08650
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127316817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127316817
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
127316817
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
127316817
DNA repair and recombination proteins [BR:
lper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127316817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
127316817
NCBI-ProteinID:
XP_051203239
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Position
7:complement(11170343..11174011)
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AA seq
450 aa
AA seq
DB search
MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVLSDRVAFERAMVGRTIVAARRRGKN
LWLQLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKSTDEWPSKYSKFFVELDDGLEFS
FTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVESLRKKKIGIKALLLDQSFV
SGIGNWIADEVLYQSRLHPLQIASSLTRESCEALHQSIQEVVKYAVDVDADSDRFPIEWL
FHHRWGKKPGKVDGKKIEFITAGGRTTAYVPQLQKLTGTKAVVADPGQVSNDGVAKEAGE
DGDDDDDDDPKPRKRVAVSRATRGKPPSRKTNPVQVSEDGGAKEVGADGDDDDLKPRKRV
ATSRAVKGQQNKDAASAPSRKTGEIAGAKKKPSIEHGSKNNVKTVESDGAGATGNNDHGL
VEPSVVVHKVSDHGVARTSSRKKTKPVKYQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtggaggcggcgcggcgggcgctggaggcgcactgcgtgggc
cggcgcatcgcgcgctgcgccgtcgcggacgaccccaaggtcgtcctatccgaccgcgtg
gccttcgagcgcgccatggtcggcaggaccatcgtcgccgcgcgcaggaggggcaagaac
ctctggctccagctcgacgccccgccattcccctccttccagttcggaatggcaggtgca
atctacatcaagggtgttgccgtcacaaagtacaagagatcagccgtcaagtccacggac
gagtggccctccaagtactccaagttctttgttgagcttgatgatggcttggagttttcc
ttcactgataagaggcgctttgcaagagttcggttgtttgatgatcctgaaactgtaccc
ccaatttctgagctaggtccagatgctctctttgagccgatgtctgttgacaattttgtg
gaatcactgagaaagaagaagattggaataaaagctcttttacttgatcagagctttgta
tcaggcattggtaattggattgcagatgaagtgctttaccagtcgagactccatccatta
cagattgcttcaagcctaacaagggagagttgtgaagcactacaccaaagcatccaagag
gttgtgaaatatgctgtcgatgttgatgctgattctgaccgctttcccattgaatggttg
tttcatcaccgctggggcaaaaagcctggtaaagttgatggaaagaaaattgaattcata
acagctggtggcaggactacagcgtatgtcccacaactgcagaagctgactggaaccaaa
gcggtagtggctgacccagggcaagtgagcaacgatggtgtcgcaaaggaagcaggggaa
gatggagatgatgatgatgatgatgatccgaagccaagaaagagagtagccgtatccagg
gctaccaggggaaagcctccttccagaaaaactaacccggtgcaagtgagcgaggatggt
ggcgccaaggaagtcggagcagatggagatgatgatgatctgaagccaagaaagagagtg
gctacatccagagctgtcaagggacaacaaaacaaggatgccgcaagtgctccctcaagg
aaaacaggggaaattgctggtgccaagaagaaaccaagcattgaacatggcagcaaaaac
aatgtcaagactgttgaatcggacggagcaggtgccactggcaacaatgatcatggctta
gtcgaacctagcgtggttgtgcacaaggtatcagaccatggcgttgcaagaacatcttca
aggaagaagaccaagcctgtcaagtatcagtag
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