Lolium perenne (perennial ryegrass): 127317152
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Entry
127317152 CDS
T08650
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1 isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04120
Ubiquitin mediated proteolysis
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127317152
04120 Ubiquitin mediated proteolysis
127317152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127317152
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127317152
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127317152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_11
zf-RING_5
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
127317152
NCBI-ProteinID:
XP_051203630
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Position
7:complement(70241999..70246584)
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AA seq
495 aa
AA seq
DB search
MIRLRTYAAFSLLATTAAVYHAFSTRGQFYPAMAHLSASKPCLVLLLNAGLVAMCAAWQL
VRRAFLGPLREAEAERLNEQAWREAVEVLFAVTIFRQEFSLAFLVMVAALLLVKALHWLA
HKRVEYIETTPSVPALSHARIVSFMAFLLVVDCIFLWNSLGSLIHKREASVAIFFSFEYM
ILATSTISTFLKYVFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRISDYVRYRKITSNMNERFPDATTDELTASDATCIICREEMT
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIIPPDNGRAASSAQQHGAQPGELLFNVA
GTGTSTSGGAPSENVNMRQAKLEAAASAASVYGRSFAYPPASTLNRHSGPMHAAPSTSQS
GEASSSTGHPLEPQPFYSHGPVGSTASSRDPENALQKAYEKAIRSQIEVLQIQLQMVQER
ATTPAATNNASAEHA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgatccggctacggacctacgcggcgttcagcctgctggcgacgacggccgccgtgtac
cacgccttcagcacgcggggccagttctacccggcgatggcccacctctcggcctccaag
ccctgcctcgtgctgctcctcaacgcgggcctcgtcgccatgtgcgccgcctggcagctc
gtccgccgcgccttcctcggcccgctccgggaggccgaggccgagcgcctcaacgagcag
gcctggcgggaggccgtcgaggtgctcttcgccgtcaccatcttccgccaggagttctcc
ctcgccttcctcgtcatggtcgccgcgctgctcctcgtcaaggcgctgcactggctcgcg
cacaagcgggtcgagtacatcgagaccacgccctcggtgccggcgctctcgcacgccagg
atcgtctccttcatggccttccttcttgttgtcgactgcatcttcctgtggaactcgctc
ggctcgctcattcacaagcgggaggcatctgttgcgatcttcttttcctttgagtatatg
atactggcaacatccacaatatcgacattcctaaagtatgtattctatgtcagcgacatg
ctaatggaaggtcaatgggagaaaaaggcagtgtatacgttttatttggagcttatcagt
gaccttgtgcacttgtctttgtatatgctcttcttcatagcaatcttcctgaactacgga
gtcccgctgcacttgatccgtgagctctatgagacctttcgcaacttcagaatccggata
tcagattatgtacgctacagaaagataacttccaacatgaatgagcgctttccagatgct
acaacagatgaactcactgcgagcgatgccacatgtattatttgccgtgaagagatgacc
acagcaaagaagctgctttgtgggcacttgttccatgtacattgtcttaggtcatggcta
gagcgccaacatacttgccccacatgtagagctccaattatccctccggacaatggacgt
gcagcatcatcagcacagcaacatggagctcaacctggtgagcttctcttcaatgttgca
ggcactggtacttcaacttcaggaggagcaccaagtgagaacgtgaacatgcgccaagca
aaacttgaggctgctgcttcagctgcttccgtgtatgggagatcatttgcttatcctcca
gcaagcactttgaatagacattcaggacctatgcatgctgcaccaagtacttcacaatca
ggagaagcaagtagttccactggccatcctttagaacctcagcctttttattcacatggt
ccagttggttctacagcaagcagcagggaccctgaaaatgctctacaaaaggcatatgaa
aaagctatcaggagccagatagaggtgttgcaaattcaattgcaaatggtgcaggaaagg
gctacaacaccagcggcaactaacaatgcgagtgctgaacatgcctga
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