Lolium perenne (perennial ryegrass): 127317327
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Entry
127317327 CDS
T08650
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03420
Nucleotide excision repair
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127317327
09124 Replication and repair
03420 Nucleotide excision repair
127317327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lper03051
]
127317327
03400 DNA repair and recombination proteins [BR:
lper03400
]
127317327
Proteasome [BR:
lper03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
127317327
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127317327
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
Rad60-SLD_2
Dsc3_N
STI1-HOP_DP
UBA_3
Crinkler
Motif
Other DBs
NCBI-GeneID:
127317327
NCBI-ProteinID:
XP_051203838
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Position
7:61497154..61503431
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AA seq
410 aa
AA seq
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MKLNVKTLKGTSFEIEAAPEASVGEVKRIIESAQGQSVYPADQQMLIYQGKILKDNTTLG
DNNVAENSFLVIMLSKPKASSSSASTASKAPVSQPAASAAASTPSVPVASVARSSPSQAP
VAASEPAPPSVQPSLDPAAAAVAASGDADVYSQAASNLVSGGGLEQTIQQILDMGGGTWE
RDMVVRALRAAYNNPERAIDYLYSGIPETVEAPPVARGPAPGQQAPSLQAPSQAQAAPLP
PVQPAGGASAGPNANPLNLFPQGVPSGGSNPGAGVGAGALDALRQLPQFQALLTLVQSNP
QILQPMLQELGKQNPQILRLIQENQAEFLRLVNETPESGAGASANILGALAAQLPQQVTV
TAEERDAIQRLEGMGFNRELVLEVFFACNRDEELAANYLLDHGHEFEDQQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtgaagaccctcaagggcacgagcttcgagatcgaggcggcccccgag
gcctcggtgggcgaggtcaagcggatcatcgagagcgctcaggggcagagcgtgtaccct
gcggaccagcagatgctcatataccagggcaaaatcctcaaggacaacaccactctggga
gacaacaatgttgccgagaacagcttccttgttataatgctgtccaagcctaaggcctcg
tctagtagtgcttctactgcttcaaaggcgcctgttagtcagcccgctgcctctgctgct
gcttctactccatctgtccctgttgcctctgttgcaagatcatcaccttcacaagcacct
gttgctgcatctgaaccggcgcctcccagtgtgcaaccttcacttgatccagctgctgct
gctgtagctgcatcaggtgatgctgatgtatacagtcaggctgcatcaaaccttgtctct
ggtggcggtctagaacagacaatccaacaaattcttgacatgggtggtggcacctgggaa
cgtgatatggttgtccgtgctctacgtgctgcatataacaatcctgagagggctatcgac
tatctatattctggaatacctgagactgtagaggccccacctgtggctcgaggacctgct
ccaggtcagcaggcaccaagcctgcaagctccatctcaggctcaggctgcacctctacca
ccagttcagccagctggtggcgcctctgcagggcctaatgcaaatcctctaaaccttttc
ccccagggtgttccaagtggtgggtccaatcctggtgctggtgtgggtgccggtgccctt
gatgcactgcgacagctacctcagttccaagcactgcttacattggttcagtctaatcct
caaatcttgcagccaatgctccaagagctggggaaacaaaacccacagatcctgcggttg
attcaggaaaatcaggctgagtttctccgcctggttaacgaaactcctgagagtggtgct
ggcgcgtccgcgaatatattaggcgccctagcagctcaattgccacagcaggttacagtt
acagcagaagaacgggatgccatccagcggctcgaggggatggggttcaaccgtgagctt
gtgttggaggtcttctttgcgtgcaacagggatgaagagctggctgccaactatctcttg
gatcatggccatgagtttgaggatcaacaatag
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