Lolium perenne (perennial ryegrass): 127317506
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Entry
127317506 CDS
T08650
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03410
Base excision repair
lper03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127317506
03450 Non-homologous end-joining
127317506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127317506
Enzymes [BR:
lper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127317506
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127317506
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
127317506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
HHH_5
NTP_transf_2
IMS_HHH_1
Cdd1
DUF1521
Motif
Other DBs
NCBI-GeneID:
127317506
NCBI-ProteinID:
XP_051204023
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All DBs
Position
7:complement(53841183..53845370)
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AA seq
543 aa
AA seq
DB search
MAPKRKPANPPADPDGIFRGVSAFFVPHGVQSRRLEVWKQKLVQMGGRVQEQKAAKGATF
NHVLAADAKALLRELDAAWLHRFRGSTVSFDWLEECLKAGERLPEHKFTINYEEEFKPKK
AAGAGDTGVSNPSKRSKMASENHKEISRQDGKKEIATGEHKIVAEGSGVEKGPNQIACSQ
SSSGDTKDTIGSQGTFDAEEASSGGPTTYTPPDLNRNITEIFGKLINIYRALGDDRRSFS
YYKAIPVIEKLPFKIESADQVKNLPAIGKSLKDHINEIVTTGKLSKLEHFENDEKVRAVN
LFGEVWGVGPATALKLYEKGYRTLNDLQKDDSLTYAQRTGLKFFDDIKQRIPRHEVSEME
KLLQEVGKDILPGVIIVCGGSYRRGKASCGDMDIVITHPDGLSHVGFLPKFVQRLKDMSF
LREDLIFSIHSVEGTDYGVDTYFGLCTYPGRELRQRIDLKVYPRNRYACGLLHWTGNDVL
NRRLRILAESKGYVLDDTGLYLATQSSGGKRAGRSEAIVNCHEEKDVFDTLGFPWLEPHE
RNL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaagcggaagccggcgaacccgccggcggaccccgacgggatattccgcggc
gtctcggccttcttcgtcccccacggcgtccagtcccgccgcctcgaggtgtggaagcag
aagctggtgcaaatggggggccgcgtccaggagcagaaggccgccaagggcgccactttc
aaccacgtgctcgccgccgacgccaaggcgctgctccgggagctcgacgccgcctggctc
caccgcttccgcgggagcacggtgtccttcgactggctggaggagtgcctcaaggccggc
gaaaggctgcccgagcacaaattcaccatcaattatgaagaggaatttaagcccaaaaag
gcagctggtgcaggagacacaggtgtgtcaaatccttcgaagaggagcaaaatggcatct
gagaatcacaaagaaattagtagacaggatgggaagaaggagatagcgaccggagagcac
aaaattgttgcagaaggttcaggtgtcgaaaaggggcctaaccaaattgcatgtagccag
agtagctctggagatactaaggataccatagggtctcagggtacatttgatgcagaggaa
gcttcttctggaggacccacaacatatactccaccagacctcaacaggaacatcactgag
atttttggaaaacttatcaacatatatagagccctcggagatgaccggagatcatttagc
tattacaaggccattcctgtaatcgagaaactgccattcaaaatagaaagtgccgaccaa
gttaaaaacctccctgctattgggaaatctttgaaagaccatattaatgaaatagtaaca
acagggaagctttccaagctggaacactttgagaatgatgaaaaggtgcgggctgtcaac
ctatttggtgaagtttggggtgttggtcctgcaactgctctcaagttatatgagaaagga
tatcgtactcttaatgaccttcaaaaagatgactcacttacatatgctcagagaactggc
ctgaagttttttgatgatatcaaacaaagaatccctcggcatgaggtcagtgagatggag
aagcttttgcaagaagttgggaaggatatcttgcctggagtgataatcgtatgtggagga
tcgtacaggcgtggaaaagcttcttgcggggacatggatattgttattactcatcctgat
ggtttaagtcatgtaggttttctgccaaagtttgttcagaggttgaaggacatgagtttt
ttgagggaggatcttatctttagcatacacagtgttgagggaactgactatggggttgat
acatattttggtctttgcacatatcctggacgtgagctgcggcaacgtattgacctgaag
gtatacccaaggaacagatatgcctgtgggctgcttcattggactggaaatgatgttcta
aatcgacgattaagaatattagcagaatccaaaggttacgtactcgatgacactggtttg
tatcttgccacacagagcagtggtggaaagcgcgcggggagatcagaagctatagttaac
tgccacgaggagaaggatgtgtttgacacacttggattcccctggttggagccccatgaa
cgaaatctctag
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